Gene
| Gene Model ID | pfu_aug2.0_504.1_14243 |
|---|---|
| Locus | scaffold504.1 : 288888 ... 303351 : - |
| To GenomeBrowser | scaffold504.1:288888..303351 |
| Genes list of scaffold | scaffold504.1 |
| Synonym | pfu_aug1.0_2434.1_30117 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_504.1_14243.t1 | 3 | 1 | Pkinase | 1 | 161 | 3.3e-39 | 134.6 | 1.4e-40 | 1.1e-36 | 126.3 |
| pfu_aug2.0_504.1_14243.t1 | 2 | 1 | Pkinase_Tyr | 2 | 162 | 5.2e-26 | 91.2 | 2.6e-29 | 1.9e-25 | 89.4 |
| pfu_aug2.0_504.1_14243.t1 | 2 | 2 | Pkinase_Tyr | 156 | 194 | 5.2e-26 | 91.2 | 0.07 | 520.0 | -0.5 |
| pfu_aug2.0_504.1_14243.t1 | 3 | 2 | Pkinase | 170 | 201 | 3.3e-39 | 134.6 | 0.00021 | 1.5 | 7.8 |
| pfu_aug2.0_504.1_14243.t1 | 3 | 3 | Pkinase | 370 | 413 | 3.3e-39 | 134.6 | 0.35 | 2600.0 | -2.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_504.1_14243.t1 | gi|731257694|ref|XP_010641395.1| | PREDICTED: serine/threonine-protein kinase Nek4 isoform X4 [Fukomys damarensis] | 0.0 |
| pfu_aug2.0_504.1_14243.t1 | gi|724832391|ref|XP_010363290.1| | PREDICTED: serine/threonine-protein kinase Nek4 isoform X5 [Rhinopithecus roxellana] | 0.0 |
| pfu_aug2.0_504.1_14243.t1 | gi|674084561|ref|XP_008850029.1| | PREDICTED: serine/threonine-protein kinase Nek4 isoform X4 [Nannospalax galili] | 0.0 |
| pfu_aug2.0_504.1_14243.t1 | gi|675728439|ref|XP_008980048.1| | PREDICTED: serine/threonine-protein kinase Nek4 isoform X5 [Callithrix jacchus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_504.1_14243.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_504.1_14243.t1 tatgcagtcaagcgtatcaatttccaaggtcaggagtctgagaggaaggcagccaagaaagaagccgacattctgtcacg tgttagtcacgacagtatcctgaattacatagaatcatttgaggacgaggaatgtctaaatatagtaacagaatattgcg atggaggagacctggaggtttacatcaaacagagagaggggaaaaaactgccagaggtccggatttgccactggattcac cagatagcctctggattaaaggtaaaggtaaaaaaatgtccatttcagtatcttcatgacaacaagatcttacacagaga tttaaagacaaagaatgtgttcttgatgggagatcttagccttaaactgggggatctcggaatagccaagttacttgagt taaatcaaagtaaagcagaaagttttgttggaactccagcatacatgagtccagaactcttcaaacatcttccatacaat cataaaagacctgctttccccagggcctacagtgagagtttaaagtccttggtctactctatgctggaagaagtaccgga ctgtagacccagtgcaacggatgtgttcatgaacccatacattaaaaggaacttggcaaagtctatctataaaagtgatt cgcctgaaaggggtagtaaagagaagaaattgaccatccagaagagtggtatgagatcaagacctcaaagctctgctcga gaaaggagaagacagagggaagaatttcgaaaatcacggacattttcaggtgaatggaaacacataaaacaacaaatcca actcgacaagctggaaaagaaaagcgtgacaaaaactgtagaaaaaatgaggaaactgaaattatcttcacataaaagtg aaagtgaaactacatcagacagttgccatagcaacgatgaagatgatagtacatttgtgaatggcggaacaacaattata gaaaaagttaggaaatataacagtcgcactgtcgggagttactttgacctagaagatcctgatagtacgttagggtcaaa tgaaagtcaaggtcataatggttttgaccttgacccaaatgtggcagctaaacaaatggtgcaaaatatgagaaataatc ttacgccgtttgaaactgtgaacacaacacaggatgaagtttttgatacaacagaaactgaaagggccaccaatcaaaag caaagaccaaagaaaaagaggaagattttatccaagatggccgttgaaaagaaaaagagtgagagcaccagcagtgccga tacaggattaggaatgtccgaggatattagctcccctgaatctcagaatggtagtgaagaggtgcgactcttcacccatg gacaacatgtcacattctccagacacaaagaaaatggagctcaatcacagaatggaaaagttctggagaaatatgttcca tttgacaagaaacaaacaacagaatcggtaaagggtgttatggctttagttggctcacaagaaaatgaatctgtttgcat ggaccttattgcacaaattcagcttgaacttgctgtagaactcggaggagagaatttccagagatgtcatgaagccatga gtgctgtaaaagatgatcaaatagtcaaggcggctagagagttttcaaaaggagggattttaagacttttgaaataa |
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Protein
| Protein ID | pfu_aug2.0_504.1_14243.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_504.1_14243.t1 YAVKRINFQGQESERKAAKKEADILSRVSHDSILNYIESFEDEECLNIVTEYCDGGDLEVYIKQREGKKLPEVRICHWIH QIASGLKVKVKKCPFQYLHDNKILHRDLKTKNVFLMGDLSLKLGDLGIAKLLELNQSKAESFVGTPAYMSPELFKHLPYN HKRPAFPRAYSESLKSLVYSMLEEVPDCRPSATDVFMNPYIKRNLAKSIYKSDSPERGSKEKKLTIQKSGMRSRPQSSAR ERRRQREEFRKSRTFSGEWKHIKQQIQLDKLEKKSVTKTVEKMRKLKLSSHKSESETTSDSCHSNDEDDSTFVNGGTTII EKVRKYNSRTVGSYFDLEDPDSTLGSNESQGHNGFDLDPNVAAKQMVQNMRNNLTPFETVNTTQDEVFDTTETERATNQK QRPKKKRKILSKMAVEKKKSESTSSADTGLGMSEDISSPESQNGSEEVRLFTHGQHVTFSRHKENGAQSQNGKVLEKYVP FDKKQTTESVKGVMALVGSQENESVCMDLIAQIQLELAVELGGENFQRCHEAMSAVKDDQIVKAAREFSKGGILRLLK |
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