Gene
| Gene Model ID | pfu_aug2.0_505.1_17497 |
|---|---|
| Locus | scaffold505.1 : 22297 ... 66215 : - |
| To GenomeBrowser | scaffold505.1:22297..66215 |
| Genes list of scaffold | scaffold505.1 |
| Synonym | pfu_aug1.0_1212.1_29617 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_505.1_17497.t1 | 4 | 1 | DUF885 | 33 | 294 | 0.0 | 693.7 | 5.5e-35 | 2.7e-31 | 109.3 |
| pfu_aug2.0_505.1_17497.t1 | 2 | 1 | LIF_OSM | 149 | 202 | 4.1e-06 | 26.7 | 6.6e-06 | 0.033 | 14.1 |
| pfu_aug2.0_505.1_17497.t1 | 4 | 2 | DUF885 | 296 | 361 | 0.0 | 693.7 | 3.0e-07 | 0.0015 | 17.8 |
| pfu_aug2.0_505.1_17497.t1 | 4 | 3 | DUF885 | 362 | 451 | 0.0 | 693.7 | 1.99993e-41 | 1.0e-37 | 130.5 |
| pfu_aug2.0_505.1_17497.t1 | 4 | 4 | DUF885 | 490 | 1039 | 0.0 | 693.7 | 0.0 | 0.0 | 432.4 |
| pfu_aug2.0_505.1_17497.t1 | 2 | 2 | LIF_OSM | 604 | 659 | 4.1e-06 | 26.7 | 6.9e-05 | 0.34 | 10.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_505.1_17497.t1 | gi|260828623|ref|XP_002609262.1| | hypothetical protein BRAFLDRAFT_86827 [Branchiostoma floridae] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_505.1_17497.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_505.1_17497.t1 atgaattgcttacaacatcaaatgttctcaggtgaccatgtggaggatctcgacaatcttcagaaggatttcagtgagtg gcgactagggcgagcaccagagtttgccacttcaattggtgtcaacagatataacgacatagtggaaaactttaactggc agagattcagcacggataaggagaagacagaattctttctaagagaactacaacacattgattataacagccttgacgac gggaataaagcaggatatgatattttcaacgacactttacacacttttctccaaggatacaaatggaaggactacaatgc tatgaatcctgtcaattttcttgagggccgaccacattacgacccggaaagctttactgaccaagctccgttctatacgt atggagactacatcaacttcatatcccgtataaagagaatgcctcaacaggttaaagacttgatcggtagaatgaacaga tctatagaacttcatcatacatactacaacaactcggtgctggacgttccgagtcaaatcgaagaaatcctgacagatag ggcagaggattttccattttacaagccgttcaccgagaagctagagaacaatacaaacattgaggatagcttgaagacta cgcttcgcaatgaagccaaaacagccattcagaatgtcctatcagaatttcgagcactaaaaacttacatgtcgcaggta tatttgaggaacacacgaagccatccaagtgtgaattcctgggataaaggtgaggagtattaccgtgattgtctccgctg gcatctgtcactagacatgtcaccagaggaggttcaccagaaaggactcgaggaagttagcaggatttcagggaaaatga acacggagcaagttttgaatctatataaagacatagtctatcggcaaatagaaccaaaattacctcagttattcaaagat cttccaaatttaccagtcattgttgcaccaacttctacagatggaacgggagggttgtacattgcgggtccagctgacgg atcaagaccaggaatattctatctcaatctcttcagaccgaaaaagatttggtcaaggcaacatgcaatacaatacatgt taaactacacggcgtccaacgaggagcaaataaccattgaaatagaccgatatcttacttggcctggtcaagcttgcgct tataaaataggagaactcaaaatcagagaacttcggaccaaagctgaaacaaatttaggtgaaaattttgatatcaaaga ttttcattctgtcgtgttgaagaacggggcattgccattgaatattttggagagagtggtcaaccagtggattcaatctg tgaaggaatcaatcgccaaaactcctgctaaaactaagacttgtgaccaagtggatgatttggataaacttcagaaggat ttcagtgaatggcgactagagcgggcaccggagtatgcaactaccataggcatccatagatataacgacatactggaaaa cttcaaatggcagaggttcgacactgataaggagaagacggaatcttttttgagcggattacaacgaattgactataaca gtcttgacgaactgaataaagcaggatatgatgtattcaatgatacattacacacttttctccaaggatacaaatggaag gactacaatgccatgaatcctgtcagtttcctggagggtccccataccgacccacaaggcttcaccgatagtgctccgtt ttatacctatggcgactatgtcaatttcctatcacgtatacagaaattgccacaacagatagaagacatgattggtagaa tgaatagatctataacgttccgtcatacatactacaacaccgcggtgctcgaagttccaaatcaaatagatggaatactg acagatcggccagaagattttccattctacaagccatttactgagaagctacagaataatacaaatattgaggatagttt gaagattacactccgcaatgacgccaaaacagccattcagaatgtcctatcgaaatttagagcactaaaaacttacatgt cacaggtatatcggaggaacacacgaagccaacctggtgtgaattcctgggataaaggtgaggagtattaccgtgattgt ctccgatggcatctgtcactagacatgtcaccagaggaggttcaccagaaaggactcgaggaagttagcagaatttcagg gaaaatgaatacaataatgaagagacttaaccatcaggggtccgtgaagcagttctttgacaatatcaagagcgattcca ggtttttcctaaacacatctgagcaagtcttgaatcgttttaatgacatagtccatcgacaaatcgaacctacattgcct cagctattcaaagatcttccaaatttgccagttgtcgttgcacctacaccaacagatggacctggaggaatgtacatgtc gggtccagcagacggctccagaccaggaacattttatcttaatcttttcagaccaaagacaatggtaactatagatttca tggcattgtcacttcacgagacaagtcctggtcatcatttacaggggagttacgccagcacattaaagaatttccctatc tatcggaaatactcgtttgacacccgttattttcaaccacccacaatgtttccctttcacacagcttatttggagggatg ggccctctactcggaggcgcttggagaggaacttaatttgtacaaggacgattacgaattgatgggacgttatggatcag agatattccgtgcctgtcgcctggtggttgatacgggtctccatcattataattggtcaagacagcatgcaatacaatac atgttgaactatacggcatacaacgaggaggcaatgacaaatgaaatagacagatatcttgtttggcctggtcaagcctg tgcttataaaataggagaactcaaaatcagagaacttcggactaaagccgaaaaagaattaggcacaaattttgatatta aagacttccattctgctgtgttgaagaatggagcactgcagctaaacattttagagagaattgttaaccaatggattcaa tctgtgaaggagtccgcctcaaccaacccagccactaatacatgcaaaggaggaacatcagcagcagaatccacttcagc aaatgtgcttcacttatttctgggaataatatggtttttgttggtacgataa |
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Protein
| Protein ID | pfu_aug2.0_505.1_17497.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_505.1_17497.t1 MNCLQHQMFSGDHVEDLDNLQKDFSEWRLGRAPEFATSIGVNRYNDIVENFNWQRFSTDKEKTEFFLRELQHIDYNSLDD GNKAGYDIFNDTLHTFLQGYKWKDYNAMNPVNFLEGRPHYDPESFTDQAPFYTYGDYINFISRIKRMPQQVKDLIGRMNR SIELHHTYYNNSVLDVPSQIEEILTDRAEDFPFYKPFTEKLENNTNIEDSLKTTLRNEAKTAIQNVLSEFRALKTYMSQV YLRNTRSHPSVNSWDKGEEYYRDCLRWHLSLDMSPEEVHQKGLEEVSRISGKMNTEQVLNLYKDIVYRQIEPKLPQLFKD LPNLPVIVAPTSTDGTGGLYIAGPADGSRPGIFYLNLFRPKKIWSRQHAIQYMLNYTASNEEQITIEIDRYLTWPGQACA YKIGELKIRELRTKAETNLGENFDIKDFHSVVLKNGALPLNILERVVNQWIQSVKESIAKTPAKTKTCDQVDDLDKLQKD FSEWRLERAPEYATTIGIHRYNDILENFKWQRFDTDKEKTESFLSGLQRIDYNSLDELNKAGYDVFNDTLHTFLQGYKWK DYNAMNPVSFLEGPHTDPQGFTDSAPFYTYGDYVNFLSRIQKLPQQIEDMIGRMNRSITFRHTYYNTAVLEVPNQIDGIL TDRPEDFPFYKPFTEKLQNNTNIEDSLKITLRNDAKTAIQNVLSKFRALKTYMSQVYRRNTRSQPGVNSWDKGEEYYRDC LRWHLSLDMSPEEVHQKGLEEVSRISGKMNTIMKRLNHQGSVKQFFDNIKSDSRFFLNTSEQVLNRFNDIVHRQIEPTLP QLFKDLPNLPVVVAPTPTDGPGGMYMSGPADGSRPGTFYLNLFRPKTMVTIDFMALSLHETSPGHHLQGSYASTLKNFPI YRKYSFDTRYFQPPTMFPFHTAYLEGWALYSEALGEELNLYKDDYELMGRYGSEIFRACRLVVDTGLHHYNWSRQHAIQY MLNYTAYNEEAMTNEIDRYLVWPGQACAYKIGELKIRELRTKAEKELGTNFDIKDFHSAVLKNGALQLNILERIVNQWIQ SVKESASTNPATNTCKGGTSAAESTSANVLHLFLGIIWFLLVR |
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