Gene
| Gene Model ID | pfu_aug2.0_505.1_17500 |
|---|---|
| Locus | scaffold505.1 : 90006 ... 102065 : - |
| To GenomeBrowser | scaffold505.1:90006..102065 |
| Genes list of scaffold | scaffold505.1 |
| Synonym | pfu_aug1.0_382.1_36526 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| intraflagellar transport protein 80 homolog | GO:0001649 GO:0002062 GO:0005813 GO:0030992 GO:0031514 GO:0042384 GO:0045880 GO:0050680 GO:0060349 GO:2000051 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_505.1_17500.t1 | 7 | 1 | WD40 | 8 | 32 | 4.5e-25 | 86.5 | 0.086 | 320.0 | 1.4 |
| pfu_aug2.0_505.1_17500.t1 | 7 | 2 | WD40 | 91 | 125 | 4.5e-25 | 86.5 | 3.5e-09 | 1.3e-05 | 24.8 |
| pfu_aug2.0_505.1_17500.t1 | 7 | 3 | WD40 | 132 | 158 | 4.5e-25 | 86.5 | 0.0015 | 5.7 | 6.9 |
| pfu_aug2.0_505.1_17500.t1 | 7 | 4 | WD40 | 175 | 207 | 4.5e-25 | 86.5 | 9.2e-09 | 3.4e-05 | 23.5 |
| pfu_aug2.0_505.1_17500.t1 | 7 | 5 | WD40 | 214 | 245 | 4.5e-25 | 86.5 | 3.9e-09 | 1.4e-05 | 24.7 |
| pfu_aug2.0_505.1_17500.t1 | 7 | 6 | WD40 | 260 | 284 | 4.5e-25 | 86.5 | 0.0094 | 35.0 | 4.4 |
| pfu_aug2.0_505.1_17500.t1 | 7 | 7 | WD40 | 502 | 514 | 4.5e-25 | 86.5 | 2.0 | 7500.0 | -3.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_505.1_17500.t1 | gi|676440086|ref|XP_009049061.1| | hypothetical protein LOTGIDRAFT_225973 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_505.1_17500.t1 | gi|524871916|ref|XP_005092728.1| | PREDICTED: intraflagellar transport protein 80 homolog [Aplysia californica] | 0.0 |
| pfu_aug2.0_505.1_17500.t1 | gi|260795593|ref|XP_002592789.1| | hypothetical protein BRAFLDRAFT_275667 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_505.1_17500.t1 | gi|390351893|ref|XP_797867.3| | PREDICTED: intraflagellar transport protein 80 homolog [Strongylocentrotus purpuratus] | 0.0 |
| pfu_aug2.0_505.1_17500.t1 | gi|632934862|ref|XP_007886712.1| | PREDICTED: intraflagellar transport protein 80 homolog [Callorhinchus milii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_505.1_17500.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_505.1_17500.t1 atgtcaaaaaactcagaattagtcagttgtgtgggatggaccacgcctgaggagtgctactctggtgccgatgaccatct ggtgctgaaatggaaccttaactctaatgaaaccacaacactggtaaaactcccagacgatgtttaccctacagacatgc actggtttccccgctctgccgggggtgggaaaaagacaggctctgatatatttgttcttacctctactgatggaaagttt catctcataagccgtacaggacgcgtagagaagagtattgatgctcataaaggtgctgtattggcagggagatggagtta cgatggttcagcattagtaacggctggagaagatggtcaggttaagatatggtcaagaagtggaatgttacggtcaacac ttacacaaaatagttcaacagtatatggaatagcatggggtcctgattcagatcaagtgctcttcacaaatggacgtcaa cttgtaataaaaactcttcaagcaaatgctaaacctacaatgtggaaagctcatgaaggagtgatactaaatgtagattg gaatcctgtaaataacctcataatctcaggagcagaggattgtaggtataaggtatgggatacttatggcagaatcatgt acagtagctcagctcatgattatcccattacatcagtggcatggacacccaatggagaactgtttgctgtcggatcattt aacacactgaggctgtgtgatcaggctgggtggtcatatgctttagagaaaccaaatactggtagcttgttcaaattatc atggtcaagcgatggtactcaagtagcaggggcttgtgggaacggccaggtgctcatagcaaatgttattgaaaagagaa tagaatggaaaaactttgaagctgttgttgctagtagtaaacaggttcatgttcgtaatgtagccaatgacgtcacagaa aaactagatttccgagacagaataatcaaggtttctctctgccataatcaccttgttgttgccacatctctacagtgtta tatatacaatacaaagaattggaatactccaatgatctttgatttgaaagagggcaatatctccatgattttacaagcag aaagacattttatgatggtggattctgtaggcgtttacatatattcgtatgacggtagacttacgtgttcacctaagtat cctgggatgagggcagatatcctcaactatcagactgtctcactcagtaatgacactgtcgccatcagggacaaaactga cgaaaaattgatttatgcatttgatgctcagaatggaaaacttttaggagatggaaaacctataagtcataagttagagg tgatggaggtagcattagatcagtgtggaccacccaccgagagaaggatggccatcatcgacaaaaaccgagatctttat ttaacgtcagtcagaacgtttggtacagacagaaagtcagtcaaattaggaaatatgatacagtcattacaatggaatga cagtgctaacatgctggcagctttagccgacggtaaatttaccgtgtggtattaccctaactctgtgtatgtagacagag atctcggagcaaagactgtgttctcaaaggaagcaagtgagtttggtaaaaacccacatcttctgcagtttgttggtaac cacgttgttatacgtcgagccgaggggtcgttagtcagtaccagtatatcaccgtacccagccatacttcacagttacgt acaagcaggacgatgggacgatgctgttaggctatgtagatttgtcaaggatgaggtattatggtcatgtctagccgcaa tgtctgcttactccaaagatctcaacacggcagaagtggcctatgcagccatcaaagatgcagagaaagtacaattcatc atcaatatcaaagatattccagtaaaggaagctcgtaatgctgagatggccctcctctgtgggagcccccaggatgctga gtccatactgctcacagctggacttaccttcagggctataatgctcaatatacaactctataactgggaaagagcactag aactggccataaagcacaaaacacatgttgatactgtattaggatacagaaaaagatacttagaacagtttgacaaaaaa gaaaagaataaacggttcttgcaatacagtgaaggaattgagattgactgggaaaaaattgaagcaaaaatagagatgga atatcagaaggaacgagagcgtccagagaggagtagtatggcatcaacggcaaacctgcaagggggtgaaaggtcaggcg gaggtgaaagggcaaggtcaaggccacaacatacgggtccatcaaactga |
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Protein
| Protein ID | pfu_aug2.0_505.1_17500.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_505.1_17500.t1 MSKNSELVSCVGWTTPEECYSGADDHLVLKWNLNSNETTTLVKLPDDVYPTDMHWFPRSAGGGKKTGSDIFVLTSTDGKF HLISRTGRVEKSIDAHKGAVLAGRWSYDGSALVTAGEDGQVKIWSRSGMLRSTLTQNSSTVYGIAWGPDSDQVLFTNGRQ LVIKTLQANAKPTMWKAHEGVILNVDWNPVNNLIISGAEDCRYKVWDTYGRIMYSSSAHDYPITSVAWTPNGELFAVGSF NTLRLCDQAGWSYALEKPNTGSLFKLSWSSDGTQVAGACGNGQVLIANVIEKRIEWKNFEAVVASSKQVHVRNVANDVTE KLDFRDRIIKVSLCHNHLVVATSLQCYIYNTKNWNTPMIFDLKEGNISMILQAERHFMMVDSVGVYIYSYDGRLTCSPKY PGMRADILNYQTVSLSNDTVAIRDKTDEKLIYAFDAQNGKLLGDGKPISHKLEVMEVALDQCGPPTERRMAIIDKNRDLY LTSVRTFGTDRKSVKLGNMIQSLQWNDSANMLAALADGKFTVWYYPNSVYVDRDLGAKTVFSKEASEFGKNPHLLQFVGN HVVIRRAEGSLVSTSISPYPAILHSYVQAGRWDDAVRLCRFVKDEVLWSCLAAMSAYSKDLNTAEVAYAAIKDAEKVQFI INIKDIPVKEARNAEMALLCGSPQDAESILLTAGLTFRAIMLNIQLYNWERALELAIKHKTHVDTVLGYRKRYLEQFDKK EKNKRFLQYSEGIEIDWEKIEAKIEMEYQKERERPERSSMASTANLQGGERSGGGERARSRPQHTGPSN |
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