Gene
| Gene Model ID | pfu_aug2.0_505.1_17502 |
|---|---|
| Locus | scaffold505.1 : 124081 ... 134855 : - |
| To GenomeBrowser | scaffold505.1:124081..134855 |
| Genes list of scaffold | scaffold505.1 |
| Synonym | pfu_aug1.0_382.1_36524 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_505.1_17502.t1 | 1 | 1 | Claudin_2 | 17 | 245 | 1.5e-16 | 60.5 | 8.4e-20 | 2.5e-16 | 59.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_505.1_17502.t1 | gi|170589063|ref|XP_001899293.1| | hypothetical protein Bm1_39195 [Brugia malayi] | 3.0e-14 |
Transcript
| Transcript ID | pfu_aug2.0_505.1_17502.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_505.1_17502.t1 atggataagaaaaaacgtatattcgtcatactaaccgtcttatgtagcttagcagcagttggtttgattgtggcttcttt tgcaactgataattggatcaaagggagtgctgaaaagcacaatacgaccattactaacaatacaagtactaacaatagag gatatgcacacatatactttggattgtttcgtggcaaaagaacaatagattacgggttttctccaagagatcaagtcatc acagtcaagtgctccagtccatattgcctactgtataatgaatcggtcctgtaccaggaggacccagataagaagtttga agatgtcgtcaatgattatgaggctgccaaaaataacatcaacatcacaggtgttgagatgtacaactatgggttatttc cctttgcctactggatctccaccatagttttaatgtcactaggtgttgttctaggacttgtgtatattggctttgccatc ttcaatatctttgggaaaccaatagaaaccatcactggacctctaggactctatctgtggaacatactggcattgctatt ttccttgggaggagtgatcgtgtacctagtcctctacatgtactactacaagaagagcatcctaccccacgaggacatat tacaggactttgtcagtactgccaatctggactcctccttctatctgtatgtgggaggagttgggtcactgctcatcaac ctccttctgctcctcatgtccggcctgaaaatgagatgtgggtgtacgcaagaagccgagaaaatcatggataacggcat tattctatattga |
|
Protein
| Protein ID | pfu_aug2.0_505.1_17502.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_505.1_17502.t1 MDKKKRIFVILTVLCSLAAVGLIVASFATDNWIKGSAEKHNTTITNNTSTNNRGYAHIYFGLFRGKRTIDYGFSPRDQVI TVKCSSPYCLLYNESVLYQEDPDKKFEDVVNDYEAAKNNINITGVEMYNYGLFPFAYWISTIVLMSLGVVLGLVYIGFAI FNIFGKPIETITGPLGLYLWNILALLFSLGGVIVYLVLYMYYYKKSILPHEDILQDFVSTANLDSSFYLYVGGVGSLLIN LLLLLMSGLKMRCGCTQEAEKIMDNGIILY |
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