Gene
| Gene Model ID | pfu_aug2.0_505.1_17504 |
|---|---|
| Locus | scaffold505.1 : 153693 ... 168735 : - |
| To GenomeBrowser | scaffold505.1:153693..168735 |
| Genes list of scaffold | scaffold505.1 |
| Synonym | pfu_aug1.0_923.1_51122 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_505.1_17504.t1 | 5 | 1 | zf-H2C2_2 | 867 | 882 | 3.9e-12 | 45.8 | 0.0031 | 15.0 | 6.0 |
| pfu_aug2.0_505.1_17504.t1 | 4 | 1 | zf-C2H2 | 872 | 892 | 1.3e-07 | 31.4 | 5.9e-05 | 0.29 | 11.5 |
| pfu_aug2.0_505.1_17504.t1 | 5 | 2 | zf-H2C2_2 | 887 | 910 | 3.9e-12 | 45.8 | 4.7e-07 | 0.0023 | 18.1 |
| pfu_aug2.0_505.1_17504.t1 | 4 | 2 | zf-C2H2 | 902 | 922 | 1.3e-07 | 31.4 | 9.6e-07 | 0.0048 | 17.1 |
| pfu_aug2.0_505.1_17504.t1 | 5 | 3 | zf-H2C2_2 | 914 | 938 | 3.9e-12 | 45.8 | 1.1e-11 | 5.4e-08 | 32.7 |
| pfu_aug2.0_505.1_17504.t1 | 4 | 3 | zf-C2H2 | 928 | 951 | 1.3e-07 | 31.4 | 9.2e-06 | 0.046 | 14.0 |
| pfu_aug2.0_505.1_17504.t1 | 5 | 4 | zf-H2C2_2 | 943 | 974 | 3.9e-12 | 45.8 | 0.0058 | 29.0 | 5.2 |
| pfu_aug2.0_505.1_17504.t1 | 4 | 4 | zf-C2H2 | 967 | 987 | 1.3e-07 | 31.4 | 0.015 | 76.0 | 3.9 |
| pfu_aug2.0_505.1_17504.t1 | 5 | 5 | zf-H2C2_2 | 985 | 993 | 3.9e-12 | 45.8 | 2.3 | 11000.0 | -3.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_505.1_17504.t1 | gi|642919953|ref|XP_008192142.1| | PREDICTED: protein ovo isoform X4 [Tribolium castaneum] | 0.0 |
| pfu_aug2.0_505.1_17504.t1 | gi|391341748|ref|XP_003745189.1| | PREDICTED: uncharacterized protein LOC100907674 [Metaseiulus occidentalis] | 0.0 |
| pfu_aug2.0_505.1_17504.t1 | gi|645014578|ref|XP_008203537.1| | PREDICTED: PR domain zinc finger protein 1 isoform X4 [Nasonia vitripennis] | 0.0 |
| pfu_aug2.0_505.1_17504.t1 | gi|645014576|ref|XP_008203536.1| | PREDICTED: PR domain zinc finger protein 1 isoform X3 [Nasonia vitripennis] | 0.0 |
| pfu_aug2.0_505.1_17504.t1 | gi|642919951|ref|XP_008192141.1| | PREDICTED: protein ovo isoform X3 [Tribolium castaneum] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_505.1_17504.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_505.1_17504.t1 atgccaaggacatttctagtccgtagagacgaatatgtagagagtgaaatagacaatatcgagttgatttcatgtgaaac cgacatcccaccatcagctgctgatgttgatgatagaccgcccagtttatcttgtgctgatacagagcggcttgacccaa cggacttcatttacgttatcagaaagatgcagtctccgaaaattactaaatgtagcggttattatcaaaaccaacaacag ctgtctcagaacgatgtaaataatttccggatgcttggaacagacagagctagaacacccctccaaccttccaattccac ggaaaggagcgagtcaaaattcttcgtcaacctggacaccgggaacattgagcaacaggcctcgccattggatatgcttg ccaacgctgctttggaacgctcagttccattggctactcgtaacgcatcgtcaaatgataccaacgtaatgccagaaaac gtgaattgcggacctctggcggaaaacagccgcaaaaatgttgccgaactgtcaaaatcgccacgcaaacatcgagcagt cgggaaagaaaattcaccgaggaaatctacgaagagaaaccaaagtttgccttcgtttgcttcactagcatacacaatgg ttttgtccaatcagaatccgaacccaaattcacagagtgatacagtttgcgcgacatcaaatggcgctaaacatacaatg ccaccggttccggtcaggaatgctctccctttggtgcgacgaaaattgccgatcaactcgccgagttttaaggtgtggaa cgaactaaaaccttccagcgttatacatccttcgtcgccttttctcagaagctgccaaccggaagtattaagatccattc aaccggaagtcaaagccaaaaagcagattttagctgttacggatccggatgagagaaaagagaatacgaaagagaattct tcagatcttcgtgcagtagaagaggcaggcaatgatacgatatgcgaaaacaaaagagatgctgtcgtattaaagaagaa aagtacatctgagaacgaagcatgttcggaaagtgacactttcgtgctttctgtcaacactgaaagttcaaacagagagg aaaatccgaagacagagcaagtaaaagagtgcttccccttgagatgtccaccagtcggacacagcacgaacagtgttata gagtcagtgttgagttctgagcaaagcgacaatatagtcgctcaaatttcagtgagagaaactttttcgaaagagtttat tacacagaacgatgaggtatcggtgttgaaaactgtatctgtacatagcgaacatacaaaaactgctaatagtgctaaac caaagatttggaatccattgttccatgagcccacacatacttcgataactcgagtgcctattgagaccgcgagtatgtca aagtccgaaaaggaagtaagcgaagtagctccacatttcaaacgtgcgtcatggcaccagccatcagtcgtatataatag ctcaacatcgtcgcaaaatatttcccacgtgaaagagcagagtccaaaggaagaaaaatctacgcatgcgcattcaatta cttccgttccatcaagtaaatcaagtttgcataaattttcgattgattccattctatctagggttgagaaacatcatgag gcgaaggatgctaatgaacagaactcttgtccaattcaaagcacatcgcaaaatgatattgaaatttcgacggaaccgga cacaatacaagcttcaaagcgcatgcgcttggatgaaaaccaaccgtttcaaagacaatccgtaattgttgcgacatcat ctgccgttccatcattgataagaacatcgacaccagtgctcaagccgacggaaccggaaacaccgcatattgacgataaa gaaaatattagtgcttcagcgactccagtttttctgtggaatatccctactaaagctgcatcgaaacaaccagggccaat cgtttacaggcatccggctttggttgccatggcgagcacaaacacctccccgaatccgaagatccccgcaaacgttttgc tcccgattttacctcaaccatcgcccatccggtctttgaaacctaccattggcgaagttcgcaactggaacatccctgta ccaagccaacagatgccgtctccgattatcgtgaagcaggaaccggaaatacgtaatcaaatccaagtttctccggcgat acagatggggccacaacattctcccgcggtacagattacaccacatgttgccgctgctgtgccgatgacgccacagatac cttctgcgatgcaggtggcgccacaagtttctcctgctgttcagatggcgccacctattctaccggctccacctacatct agtactcatatttcttttcaaaaacaacaacaaccgaaggttggagggattcaagtgtatgatgaaagcaattcgggaaa tgtgccaatccctttgtcggcggaagtagaactagtgaacggaggattcggtttgaagaacccgtctttccgtccaccaa aaccttcagatatcaccaatgtcagcaaagatccagtaaccggaaacgggaagtacgcatgttcagtatgtaagaaggag tttgcgctgcagcgattgctgaatcgtcatttgaaatgtcacagcgacaccaaacggtttctgtgtacgttctgcggaaa gggctttaacgacacatttgatctaaaacgtcacactcgtatacataccggagtgaagccatacaaatgcagtaaatgtg aacgttcattcacacagcgttgttcactggaatcacattgtcggaaggttcacaacatagagttcacatacgcttacaaa caacggcggagtaaaatctacgtatgtgaagaatgcggtcattctacagatgacccggaagtacattatgttcatctccg tgacaaccatccaaacaaccctgccctctcaaagtgtcatgacaaacggcagttcaaattcaacgaaaacaacacggcca acagacaaactttatctttgccgagaacgtga |
|
Protein
| Protein ID | pfu_aug2.0_505.1_17504.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_505.1_17504.t1 MPRTFLVRRDEYVESEIDNIELISCETDIPPSAADVDDRPPSLSCADTERLDPTDFIYVIRKMQSPKITKCSGYYQNQQQ LSQNDVNNFRMLGTDRARTPLQPSNSTERSESKFFVNLDTGNIEQQASPLDMLANAALERSVPLATRNASSNDTNVMPEN VNCGPLAENSRKNVAELSKSPRKHRAVGKENSPRKSTKRNQSLPSFASLAYTMVLSNQNPNPNSQSDTVCATSNGAKHTM PPVPVRNALPLVRRKLPINSPSFKVWNELKPSSVIHPSSPFLRSCQPEVLRSIQPEVKAKKQILAVTDPDERKENTKENS SDLRAVEEAGNDTICENKRDAVVLKKKSTSENEACSESDTFVLSVNTESSNREENPKTEQVKECFPLRCPPVGHSTNSVI ESVLSSEQSDNIVAQISVRETFSKEFITQNDEVSVLKTVSVHSEHTKTANSAKPKIWNPLFHEPTHTSITRVPIETASMS KSEKEVSEVAPHFKRASWHQPSVVYNSSTSSQNISHVKEQSPKEEKSTHAHSITSVPSSKSSLHKFSIDSILSRVEKHHE AKDANEQNSCPIQSTSQNDIEISTEPDTIQASKRMRLDENQPFQRQSVIVATSSAVPSLIRTSTPVLKPTEPETPHIDDK ENISASATPVFLWNIPTKAASKQPGPIVYRHPALVAMASTNTSPNPKIPANVLLPILPQPSPIRSLKPTIGEVRNWNIPV PSQQMPSPIIVKQEPEIRNQIQVSPAIQMGPQHSPAVQITPHVAAAVPMTPQIPSAMQVAPQVSPAVQMAPPILPAPPTS STHISFQKQQQPKVGGIQVYDESNSGNVPIPLSAEVELVNGGFGLKNPSFRPPKPSDITNVSKDPVTGNGKYACSVCKKE FALQRLLNRHLKCHSDTKRFLCTFCGKGFNDTFDLKRHTRIHTGVKPYKCSKCERSFTQRCSLESHCRKVHNIEFTYAYK QRRSKIYVCEECGHSTDDPEVHYVHLRDNHPNNPALSKCHDKRQFKFNENNTANRQTLSLPRT |
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