Gene
| Gene Model ID | pfu_aug2.0_5074.1_16064 |
|---|---|
| Locus | scaffold5074.1 : 20086 ... 30199 : + |
| To GenomeBrowser | scaffold5074.1:20086..30199 |
| Genes list of scaffold | scaffold5074.1 |
| Synonym | pfu_aug1.0_6907.1_02328 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_5074.1_16064.t1 | 2 | 1 | cNMP_binding | 201 | 289 | 7.8e-15 | 54.4 | 2.8e-07 | 0.0041 | 16.9 |
| pfu_aug2.0_5074.1_16064.t1 | 2 | 2 | cNMP_binding | 328 | 421 | 7.8e-15 | 54.4 | 7.4e-13 | 1.1e-08 | 34.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_5074.1_16064.t1 | gi|524879291|ref|XP_005096323.1| | PREDICTED: uncharacterized protein LOC101851033 [Aplysia californica] | 0.0 |
| pfu_aug2.0_5074.1_16064.t1 | gi|676445903|ref|XP_009050904.1| | hypothetical protein LOTGIDRAFT_231321 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_5074.1_16064.t1 | gi|390340966|ref|XP_781311.3| | PREDICTED: cyclic nucleotide-binding domain-containing protein 1 [Strongylocentrotus purpuratus] | 0.0 |
| pfu_aug2.0_5074.1_16064.t1 | gi|260798286|ref|XP_002594131.1| | hypothetical protein BRAFLDRAFT_118770 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_5074.1_16064.t1 | gi|156398012|ref|XP_001637983.1| | predicted protein [Nematostella vectensis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_5074.1_16064.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_5074.1_16064.t1 atgacaagacctttcaatttatgcctgcccaagctagtagatgagccgacacctgttattgactatgagaaattaagatg gctatgtgaaatagatggactaaaaggaaaagggcaaccagataccacaccagaagcacacgatgagttcatgcgcagtt atcacgaaatcttcgcacggccagagaagaaatctggattccctgaccattcacgaagacgaagtgaacagagatcctct atggtgactctaacacagagagctacaggaaaatcaagtgaagccgaaaagaaagaacccaagaaattataccccattga tgacattactcatgatatcagggactatatgccgttattccataaacaacgtaaaagtgaaaggccagaacatgtgagaa gcgacaatcttaaaaccctgcgtaaactattgaagaaactgccatttgagagaacagctacagagaatgacaaagtatgt agcatcctaaaaacctttgatttcttcaaagaaaaaattgacagcaatgtacttaaagaactctgtgtggtggctgtatt agaacaatggaaagatcccggattcacagtatttgggagatctgggttatacatggtactgaagggcaaggtcaaaccta taacatatccttatctgaacgaagacaacgagcctcaggactcaagggcccctactcctctactcactgacgaaaatgaa gatgtgctgaagcctggtgattgcttcggaacacttacaaaggttaaaagagagcagggttcaagaatattcagtgtgga gacaatagatcaaaactgtgaatttctgaagatatcatcctcagattataccagagtcatagagcaaatcaagcatagga atcatacagagaaggtgaacctgttactatcatgtggacagtatcagctatggcccaaacaacccgttctcaaagtagca gacctaatagaatggatggctctaccacctaacacattgatagctagtgagggatacaaggccccatacatcggcttcat aaagaagggagagtgtcatgtactaagacaagtagatgtcatgcataccctcaggaatggaagaagggaaaagagaacaa agcaggtagtgatgggaaaactaaaggattctgagtcgtttgccgaactgagtgtccttctggatgaaccaatcacatgt acgatattaacgtcaagtaatgttgagctgggagttatcaagaaagatagaataagagaattagacgatgatactaccaa actctttcaacaatcaaacgaacggacattcggcaatctaactaagaatgacatccaagaggaatatatgaaccaagaat taaagagagaatggaacgaattcaaacatggagtcatgatggaagtcattaattataaaggaattcgacctgggtacgga aaatgggcaaaataa |
|
Protein
| Protein ID | pfu_aug2.0_5074.1_16064.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_5074.1_16064.t1 MTRPFNLCLPKLVDEPTPVIDYEKLRWLCEIDGLKGKGQPDTTPEAHDEFMRSYHEIFARPEKKSGFPDHSRRRSEQRSS MVTLTQRATGKSSEAEKKEPKKLYPIDDITHDIRDYMPLFHKQRKSERPEHVRSDNLKTLRKLLKKLPFERTATENDKVC SILKTFDFFKEKIDSNVLKELCVVAVLEQWKDPGFTVFGRSGLYMVLKGKVKPITYPYLNEDNEPQDSRAPTPLLTDENE DVLKPGDCFGTLTKVKREQGSRIFSVETIDQNCEFLKISSSDYTRVIEQIKHRNHTEKVNLLLSCGQYQLWPKQPVLKVA DLIEWMALPPNTLIASEGYKAPYIGFIKKGECHVLRQVDVMHTLRNGRREKRTKQVVMGKLKDSESFAELSVLLDEPITC TILTSSNVELGVIKKDRIRELDDDTTKLFQQSNERTFGNLTKNDIQEEYMNQELKREWNEFKHGVMMEVINYKGIRPGYG KWAK |
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