Gene
| Gene Model ID | pfu_aug2.0_508.1_27482 |
|---|---|
| Locus | scaffold508.1 : 10524 ... 42215 : - |
| To GenomeBrowser | scaffold508.1:10524..42215 |
| Genes list of scaffold | scaffold508.1 |
| Synonym | pfu_aug1.0_23964.1_18968 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_508.1_27482.t1 | 6 | 1 | TSP_1 | 137 | 185 | 1.0e-08 | 35.1 | 2.7e-12 | 1.0e-08 | 35.1 |
| pfu_aug2.0_508.1_27482.t1 | 11 | 1 | EGF | 141 | 151 | 2.8e-06 | 27.1 | 0.57 | 2100.0 | -1.2 |
| pfu_aug2.0_508.1_27482.t1 | 9 | 1 | EGF_2 | 158 | 167 | 2.2e-18 | 66.1 | 2.2 | 8200.0 | -3.0 |
| pfu_aug2.0_508.1_27482.t1 | 9 | 2 | EGF_2 | 185 | 214 | 2.2e-18 | 66.1 | 0.00016 | 0.58 | 10.3 |
| pfu_aug2.0_508.1_27482.t1 | 11 | 2 | EGF | 185 | 195 | 2.8e-06 | 27.1 | 0.057 | 210.0 | 1.9 |
| pfu_aug2.0_508.1_27482.t1 | 11 | 3 | EGF | 202 | 213 | 2.8e-06 | 27.1 | 0.00027 | 1.0 | 9.3 |
| pfu_aug2.0_508.1_27482.t1 | 8 | 1 | hEGF | 203 | 214 | 1.3e-13 | 50.0 | 5.4e-06 | 0.02 | 14.9 |
| pfu_aug2.0_508.1_27482.t1 | 9 | 3 | EGF_2 | 219 | 246 | 2.2e-18 | 66.1 | 4.0e-06 | 0.015 | 15.4 |
| pfu_aug2.0_508.1_27482.t1 | 11 | 4 | EGF | 219 | 244 | 2.8e-06 | 27.1 | 0.00029 | 1.1 | 9.3 |
| pfu_aug2.0_508.1_27482.t1 | 6 | 2 | TSP_1 | 225 | 233 | 1.0e-08 | 35.1 | 4.0 | 15000.0 | -6.1 |
| pfu_aug2.0_508.1_27482.t1 | 8 | 2 | hEGF | 234 | 246 | 1.3e-13 | 50.0 | 2.4e-05 | 0.088 | 12.9 |
| pfu_aug2.0_508.1_27482.t1 | 9 | 4 | EGF_2 | 251 | 278 | 2.2e-18 | 66.1 | 1.1e-05 | 0.041 | 14.0 |
| pfu_aug2.0_508.1_27482.t1 | 11 | 5 | EGF | 251 | 273 | 2.8e-06 | 27.1 | 0.0079 | 29.0 | 4.7 |
| pfu_aug2.0_508.1_27482.t1 | 8 | 3 | hEGF | 266 | 273 | 1.3e-13 | 50.0 | 0.0011 | 4.2 | 7.6 |
| pfu_aug2.0_508.1_27482.t1 | 11 | 6 | EGF | 278 | 307 | 2.8e-06 | 27.1 | 1.0e-06 | 0.0038 | 17.1 |
| pfu_aug2.0_508.1_27482.t1 | 6 | 3 | TSP_1 | 281 | 320 | 1.0e-08 | 35.1 | 4.0 | 15000.0 | -8.6 |
| pfu_aug2.0_508.1_27482.t1 | 9 | 5 | EGF_2 | 282 | 309 | 2.2e-18 | 66.1 | 1.2e-07 | 0.00043 | 20.3 |
| pfu_aug2.0_508.1_27482.t1 | 8 | 4 | hEGF | 298 | 309 | 1.3e-13 | 50.0 | 1.4e-05 | 0.052 | 13.6 |
| pfu_aug2.0_508.1_27482.t1 | 11 | 7 | EGF | 312 | 340 | 2.8e-06 | 27.1 | 1.4e-06 | 0.0051 | 16.7 |
| pfu_aug2.0_508.1_27482.t1 | 9 | 6 | EGF_2 | 314 | 341 | 2.2e-18 | 66.1 | 5.0e-07 | 0.0019 | 18.3 |
| pfu_aug2.0_508.1_27482.t1 | 8 | 5 | hEGF | 330 | 341 | 1.3e-13 | 50.0 | 1.4e-05 | 0.051 | 13.6 |
| pfu_aug2.0_508.1_27482.t1 | 6 | 4 | TSP_1 | 331 | 342 | 1.0e-08 | 35.1 | 4.0 | 15000.0 | -7.5 |
| pfu_aug2.0_508.1_27482.t1 | 9 | 7 | EGF_2 | 346 | 373 | 2.2e-18 | 66.1 | 2.1e-05 | 0.077 | 13.1 |
| pfu_aug2.0_508.1_27482.t1 | 11 | 8 | EGF | 346 | 371 | 2.8e-06 | 27.1 | 0.0031 | 11.0 | 6.0 |
| pfu_aug2.0_508.1_27482.t1 | 8 | 6 | hEGF | 362 | 373 | 1.3e-13 | 50.0 | 0.003 | 11.0 | 6.3 |
| pfu_aug2.0_508.1_27482.t1 | 6 | 5 | TSP_1 | 376 | 388 | 1.0e-08 | 35.1 | 4.0 | 15000.0 | -6.9 |
| pfu_aug2.0_508.1_27482.t1 | 9 | 8 | EGF_2 | 378 | 405 | 2.2e-18 | 66.1 | 2.5e-05 | 0.093 | 12.9 |
| pfu_aug2.0_508.1_27482.t1 | 11 | 9 | EGF | 382 | 403 | 2.8e-06 | 27.1 | 0.00021 | 0.79 | 9.7 |
| pfu_aug2.0_508.1_27482.t1 | 8 | 7 | hEGF | 393 | 403 | 1.3e-13 | 50.0 | 0.00067 | 2.5 | 8.3 |
| pfu_aug2.0_508.1_27482.t1 | 6 | 6 | TSP_1 | 403 | 438 | 1.0e-08 | 35.1 | 4.0 | 15000.0 | -4.0 |
| pfu_aug2.0_508.1_27482.t1 | 9 | 9 | EGF_2 | 410 | 436 | 2.2e-18 | 66.1 | 7.7e-06 | 0.029 | 14.5 |
| pfu_aug2.0_508.1_27482.t1 | 11 | 10 | EGF | 410 | 435 | 2.8e-06 | 27.1 | 7.4e-05 | 0.28 | 11.2 |
| pfu_aug2.0_508.1_27482.t1 | 8 | 8 | hEGF | 425 | 436 | 1.3e-13 | 50.0 | 2.5e-05 | 0.092 | 12.8 |
| pfu_aug2.0_508.1_27482.t1 | 11 | 11 | EGF | 473 | 495 | 2.8e-06 | 27.1 | 1.1 | 4000.0 | -2.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_508.1_27482.t1 | gi|583995728|ref|XP_006792987.1| | PREDICTED: von Willebrand factor D and EGF domain-containing protein-like [Neolamprologus brichardi] | 0.0 |
| pfu_aug2.0_508.1_27482.t1 | gi|699654838|ref|XP_009897222.1| | PREDICTED: von Willebrand factor D and EGF domain-containing protein [Picoides pubescens] | 0.0 |
| pfu_aug2.0_508.1_27482.t1 | gi|657588458|ref|XP_008298569.1| | PREDICTED: von Willebrand factor D and EGF domain-containing protein-like [Stegastes partitus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_508.1_27482.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_508.1_27482.t1 atggatattgttcgttcagtaacaccggtcgggaaagcagtttttattatcagtaattttggtgataaaaagttgtgcta tgccgacgttacttccggtgaaagttacattttatttcttaccgaataccaagggaggttatcagctcaatatgacgata ttttcggggcagcggttagtttcaccaaacagaatgaagacgaagttgtaaagcaaatagaaaatcataaaccgaaggct tacaaaatcaggataaaacaagaaccaaaggagcatgcaataaaagacgatggacgcgttgtgccaaattatggacaaaa agtgtcgtctgcaccggaaaagggggatatcaaacttgttacggactcaaaagttatccagaaaacgtcaccaactccac cattagtacaatggtcgtcatggtcaccttgcagtgccacctgtggaaaagggacacaatcgcgatctctttactgcaat aacaataaagttgaaaagtgttccgtaaatacagatttgggttcgcagtctaggctctgttacctaacagaatgtaaaga tgacatgtgtaaaaatggcggccagtattccatgttatatcaaaggtgtcagtgtacctcaggttttacggggaagtatt gtgaaaaatatcattgtgaccctatatgtttgaatggaggtaattgtacaggtccgaacgtatgtacctgccctacaggc tactcaggaaaatcatgtaatacagctatttgcagacctaagtgtaggaatggtggtctctgtgccaggcctgacgtctg tacctgtcctcagggatatctacctccgtattgtaaaccaaaatgttccgccgtttgtaagaatggaggacgatgtatta gaaggaatagatgcaagtgtaaacgaggatacaccggcagtgactgtacaacacccgtttgccgtcgaggttgtagtaat ggtggtacttgcgttgcccctaacaggtgttcctgcccgaggggattcaaaggaagaaggtgtcacaaagcaatatgcag accaaaatgcagaaacgatggttcatgtgcatatcctaatatctgcacttgtaggaatggattttttggtttgcagtgtg aaaaatataagtgcaagcgaacgtgcaaaaatggtggattctgtatcggtccaaataaatgtgcatgtaaacctggttac cacggaaagtggtgccatctagggcattgcaaacagtcatgtctgaacggtggtaaatgcaggaacaatagatgtagatg tcgaaatgggttcaaaggaaaacggtgccaacaaagatcttgccgttatgaaaaatatgttcagccatacgatcgctcat accggaaactgataagagaagactatgtcacaaaatgtggaccttggacgtggaaaacatgtgtgaaaacaagggttcgt tatgaattagtgtcaaagactatgtacaggacagcatacagatgtgtctaa |
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Protein
| Protein ID | pfu_aug2.0_508.1_27482.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_508.1_27482.t1 MDIVRSVTPVGKAVFIISNFGDKKLCYADVTSGESYILFLTEYQGRLSAQYDDIFGAAVSFTKQNEDEVVKQIENHKPKA YKIRIKQEPKEHAIKDDGRVVPNYGQKVSSAPEKGDIKLVTDSKVIQKTSPTPPLVQWSSWSPCSATCGKGTQSRSLYCN NNKVEKCSVNTDLGSQSRLCYLTECKDDMCKNGGQYSMLYQRCQCTSGFTGKYCEKYHCDPICLNGGNCTGPNVCTCPTG YSGKSCNTAICRPKCRNGGLCARPDVCTCPQGYLPPYCKPKCSAVCKNGGRCIRRNRCKCKRGYTGSDCTTPVCRRGCSN GGTCVAPNRCSCPRGFKGRRCHKAICRPKCRNDGSCAYPNICTCRNGFFGLQCEKYKCKRTCKNGGFCIGPNKCACKPGY HGKWCHLGHCKQSCLNGGKCRNNRCRCRNGFKGKRCQQRSCRYEKYVQPYDRSYRKLIREDYVTKCGPWTWKTCVKTRVR YELVSKTMYRTAYRCV |
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