Gene
| Gene Model ID | pfu_aug2.0_508.1_27487 |
|---|---|
| Locus | scaffold508.1 : 155006 ... 188263 : + |
| To GenomeBrowser | scaffold508.1:155006..188263 |
| Genes list of scaffold | scaffold508.1 |
| Synonym | pfu_aug1.0_15036.1_39661 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_508.1_27487.t1 | 3 | 1 | Macro | 322 | 429 | 0.0 | 235.2 | 6.3e-28 | 5.5e-25 | 87.5 |
| pfu_aug2.0_508.1_27487.t1 | 3 | 1 | zf-C3HC4 | 372 | 380 | 1.1e-08 | 34.5 | 2.5 | 2200.0 | -1.6 |
| pfu_aug2.0_508.1_27487.t1 | 2 | 1 | zf-RING_5 | 374 | 381 | 8.1e-07 | 28.6 | 8.8 | 7700.0 | -3.3 |
| pfu_aug2.0_508.1_27487.t1 | 3 | 2 | Macro | 759 | 876 | 0.0 | 235.2 | 2.5e-34 | 2.2e-31 | 108.2 |
| pfu_aug2.0_508.1_27487.t1 | 3 | 2 | zf-C3HC4 | 812 | 818 | 1.1e-08 | 34.5 | 8.3 | 7300.0 | -3.3 |
| pfu_aug2.0_508.1_27487.t1 | 2 | 1 | zf-Nse | 966 | 976 | 9.5e-06 | 25.0 | 3.2 | 2800.0 | -2.1 |
| pfu_aug2.0_508.1_27487.t1 | 3 | 3 | Macro | 1013 | 1118 | 0.0 | 235.2 | 8.3e-13 | 7.3e-10 | 38.7 |
| pfu_aug2.0_508.1_27487.t1 | 2 | 2 | zf-Nse | 1360 | 1404 | 9.5e-06 | 25.0 | 2.6e-08 | 2.3e-05 | 23.8 |
| pfu_aug2.0_508.1_27487.t1 | 1 | 1 | zf-rbx1 | 1361 | 1404 | 7.8e-07 | 29.1 | 4.4e-09 | 3.9e-06 | 26.8 |
| pfu_aug2.0_508.1_27487.t1 | 1 | 1 | zf-C3HC4_3 | 1362 | 1406 | 1.6e-08 | 34.0 | 3.7e-11 | 3.3e-08 | 33.0 |
| pfu_aug2.0_508.1_27487.t1 | 1 | 1 | zf-RING_2 | 1364 | 1403 | 3.4e-10 | 39.5 | 3.9e-13 | 3.4e-10 | 39.5 |
| pfu_aug2.0_508.1_27487.t1 | 2 | 2 | zf-RING_5 | 1364 | 1405 | 8.1e-07 | 28.6 | 9.3e-10 | 8.1e-07 | 28.6 |
| pfu_aug2.0_508.1_27487.t1 | 1 | 1 | zf-C3HC4_2 | 1365 | 1403 | 1.1e-10 | 41.2 | 3.4e-13 | 2.9e-10 | 39.9 |
| pfu_aug2.0_508.1_27487.t1 | 3 | 3 | zf-C3HC4 | 1365 | 1403 | 1.1e-08 | 34.5 | 1.3e-11 | 1.1e-08 | 34.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_508.1_27487.t1 | gi|176866361|ref|NP_001116534.1| | uncharacterized protein LOC100144568 [Danio rerio] | 0.0 |
| pfu_aug2.0_508.1_27487.t1 | gi|573877200|ref|XP_006626853.1| | PREDICTED: E3 ubiquitin-protein ligase DTX3L-like [Lepisosteus oculatus] | 0.0 |
| pfu_aug2.0_508.1_27487.t1 | gi|658865582|ref|XP_008415647.1| | PREDICTED: E3 ubiquitin-protein ligase DTX3L-like [Poecilia reticulata] | 0.0 |
| pfu_aug2.0_508.1_27487.t1 | gi|585653386|ref|XP_006884369.1| | PREDICTED: E3 ubiquitin-protein ligase DTX3L [Elephantulus edwardii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_508.1_27487.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_508.1_27487.t1 atgagtgggaaaagtcatactggatacccagagaaacatcaattcgatcaactgaacacaaaaatactagatggtctata ccatgaagaattgcacagattaaataaaatgccagacaagatcaaactagtgcacctcgagggttatgtcgtcctgagag caaaatcaccaactcttttggcaacgtataaagataaattgaataaaatggtgtcgagtgttgtggatcagtgcagtgat gtttcattggcagtaactgacaataaagaatgtttgaagattataagatatatggacgccaagattacggagaagaaatt taatggtgaccttgtatacaccagcggaagtgcaggaaatgcaaaatcatttcgtttttacagcaaagatagagaaaagg ctatcgaagtccgggattacattgaaagaactttattacaacgtaacacagatttgtcaagacctcttacagataaagcg aatgttgatgaatcaggaaattccagacctagtacccaaaacaagagtgctagcacacgtccaaaatcaagcacaaaaag taaatcctcatcagtccaggtacgacaaagttcagtcgactctgatatgcacgcggctgtgaagcccaaggcaaagtcag ttatgaccccaaacaaagggtctgtcggagaaactctttatagtctgccaccacagaaggtagtgagagctgtatcattt gataaagtatcatctcgtgataagagtggactcgagagtgaaaaacgtcatagtgactatgttagcctcggcgctggtgc atcaaatacacatgagttccatctagatgcaaacgcacaagttggttcgagtgggcagtctgctgcacatagtcaacaga catataacaagagtgttattgtaaatggacttacagtacgattcatacttattccattgacaaagatacctgtagacgct atagtaaatgcagccaataaaactctttcaaacggggctggtgttgctttggccattgcaaaggaagctggaaagcagta tcagagggagtgtgatgatctagttaagaagcatggggaaattgcagtgtccgaaaatgctgtaacaaattcacacaagc tcaagacttgtaaacatgtcattaatgctgtcggtccaggctgggctgattacacagacaaagaagatgctctgaaagac ctagctctgacagtggagaatgttttggagactgctgtgacaatgaatatgacctctgttgctatgcctcctatttcttc aggtacgttgatggatcataagataagtttatccaagatgagtgggaaaagtcacaaagaatacccacagaaacatcgtt tcgataagctgtctacaaaattacttgaagatttgtttgcagaagagcttcattacataaatgaaaaaaaagaaaatgta agtcttgttccaaacaatggtgctgtacttctcagggctgcaaatcctgctcttctggcaacctacaaacgatttttgga tgcaaaggtcgcaaaagttgtgagtgaatgtaaagatatttcgttagcagtacaaagcaaagaggaatatgatgaggttg aaaagtttttgaagaaaaacatttcgatgttcgaaagaagaataacttacaaaaccggagaaggtgggacagcaaagaca tttcgtttttacagtgaagacaggaaccaggcaatcgaatgccgcgataacattgaaagaactgtattacaacgtaacat agatgtgcttagaccaaactcaggtaaagcgaatgttgatgaagcaggaaattccagacctagtgcccaaaataagagtg gaagcaaacgtccaaaatcaagcacaaaaagtaaatcctcatcagtccaggtacgacaaagttcagtcgactccaatatg cacgcggctgtgaagcccaaggcaaagtcagttatgataccaaacaaagggtctgtcggagaaactccttatagtctgcc actacataaggtagttagagctgtatcatttgagaaagtatcatctcgtgataagagtggactcgagagtgaaaaacgcc atagtgattatgttagcgtcggcgctggtgcatcaaatacacatgagttccatctagatgcaaacgcacaaggtggttcg agtggatcaccaggtgcacaaaatccacagacatatagcaagagtgtaattgttaatggacttacagtacgattcatgct tattccattgacaaaaatatctgtagacgctatagtaaatgcagccaataaaaatctttcaaacggggctggtgttgctt tggccattgcaaaggaagctggaaagcagtatcagagggagtgtgatgatctagttaagaagaatggaaaaattgcagtg tccaaaaatgttgtaacaaaatcacacaagctgcagaagacttgtaaacatgtcataaatgctgtcggtccagactgggc tgactatacagacaaagaagatgctctgaaagacctagctctgacagtggagaatgtattggagactgctgcgacaatga atatgacctctgttgctatgcctcctatttcttcaggcatatttggatttcctaaagaagcatgtgcgtggatgtattct aaaggagtgctcgattttacatggaagggctctcatggtcagttaaaagaagttattctggtggatgttcaggacagcac aatattggacatgacgttccagtatctttccaagatatcaaataatggtgcgacgatacaaatcaaagatgttctcaaat ctttgccaaaggaacagcctttgcgaggtgctgaaggaggtacagcaagagcagacaaatcaaaaagaaagagtgtgaaa gcttcaacaaacacaacggacagattatgttcacatacaatggaaaagggtgtggatattttcaacttcagaaattcagt ggaagtgttagtttataccgaagatataattagattaccaaatgtggacattttggtaactccagaaagtcgcagtttta aaggtgaaggcattcttgcaaggaaaattgctgaaacggcgggtaaagattataccaaagagcgcagaaaattagaaggt caaccaagacagagtggggaaatactgattaccattgccgggaacctcaagtttcagaaaatatttcatgtgattatgtc aaggtttgacgataggggtcccccgagtgatactcagcttaaccagttcaaaacgttgatcaaagacgtaattcaaagag caaatgatctgaatgtcaagaagacaaagtttaagtccatcgccatgcctcttttaggcacaggtcacattagagatcag tggctccttacagctattggagctgctgtatttgatggcatatatcgttattccaaatctgccaaaacgagtgtaaaaga aatccacttggtcaacataaatgaggaaacaaccagtgccatccgcaagattttcttgagtgaggcaactggtcagctta atcaagaagacgaagaaagagtgactgaaatggaggaacgaagaagacctcatgtggacaatcccaaagaagcactcact cctttggatgtttggaaaacaaatacaaaagacaaagcagctgttgacttaaaatcctgcatcatagaaaaagggaacct agctattattgacgatgacgatgaatcagataatagttgtcacattagagatcagtggctcctaacagctattggaggtg ctgtatttgatggcatatatcgttattccaaatctgccaaaacgagtgtaaagaaaatccacttggtcaacataaatgag gaaacaaccagtgccatccgcaagattttcttgagtgaggcaactggtcagcttaatcaagaagacgaagaaagagtgac tgaaatggaggaacgaagaagacctcatgtggacaatcccaaagaagcacttgctcctttggatgtttggaaaacaaata caaaagacaaagcagctgttgacttagaatcctgcatcatagaaaaagggaacctagctattattgacgatgacgatgaa tcagataatagttgtgtggtatgcatggaacctatggaccaaccagtagcactacgaaattgtgggcatcagttttgtcg agactgtatcttggattatttttccaggaaaccgtcttgtcccatgtgtaacacgatgtacggaaagctttatggtgatc agcctgttgatgctacggctaatgtttacttggacaaatcatcacttcctggacatgaaggacatgggacgtttatcata gattatgatattcctgatggaaggcagaatgatcaacatccgaatccgggtatgtcttatcgtggatttcgaagacgggc ttacctccctgacacagaagaaggtcaaacggttcttcatcttctaagagaagcatttaatcaaggccttatatttacta tcggatactcgcggaccacggggaaggacaacgtgctgacatggaatgatatccaccataaaacgcggaaagaaggcgga ccacagagatttggttaccccgatccggagtacatcccaagagtcaaagaggaactggcagctaaaggaattcgttga |
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Protein
| Protein ID | pfu_aug2.0_508.1_27487.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_508.1_27487.t1 MSGKSHTGYPEKHQFDQLNTKILDGLYHEELHRLNKMPDKIKLVHLEGYVVLRAKSPTLLATYKDKLNKMVSSVVDQCSD VSLAVTDNKECLKIIRYMDAKITEKKFNGDLVYTSGSAGNAKSFRFYSKDREKAIEVRDYIERTLLQRNTDLSRPLTDKA NVDESGNSRPSTQNKSASTRPKSSTKSKSSSVQVRQSSVDSDMHAAVKPKAKSVMTPNKGSVGETLYSLPPQKVVRAVSF DKVSSRDKSGLESEKRHSDYVSLGAGASNTHEFHLDANAQVGSSGQSAAHSQQTYNKSVIVNGLTVRFILIPLTKIPVDA IVNAANKTLSNGAGVALAIAKEAGKQYQRECDDLVKKHGEIAVSENAVTNSHKLKTCKHVINAVGPGWADYTDKEDALKD LALTVENVLETAVTMNMTSVAMPPISSGTLMDHKISLSKMSGKSHKEYPQKHRFDKLSTKLLEDLFAEELHYINEKKENV SLVPNNGAVLLRAANPALLATYKRFLDAKVAKVVSECKDISLAVQSKEEYDEVEKFLKKNISMFERRITYKTGEGGTAKT FRFYSEDRNQAIECRDNIERTVLQRNIDVLRPNSGKANVDEAGNSRPSAQNKSGSKRPKSSTKSKSSSVQVRQSSVDSNM HAAVKPKAKSVMIPNKGSVGETPYSLPLHKVVRAVSFEKVSSRDKSGLESEKRHSDYVSVGAGASNTHEFHLDANAQGGS SGSPGAQNPQTYSKSVIVNGLTVRFMLIPLTKISVDAIVNAANKNLSNGAGVALAIAKEAGKQYQRECDDLVKKNGKIAV SKNVVTKSHKLQKTCKHVINAVGPDWADYTDKEDALKDLALTVENVLETAATMNMTSVAMPPISSGIFGFPKEACAWMYS KGVLDFTWKGSHGQLKEVILVDVQDSTILDMTFQYLSKISNNGATIQIKDVLKSLPKEQPLRGAEGGTARADKSKRKSVK ASTNTTDRLCSHTMEKGVDIFNFRNSVEVLVYTEDIIRLPNVDILVTPESRSFKGEGILARKIAETAGKDYTKERRKLEG QPRQSGEILITIAGNLKFQKIFHVIMSRFDDRGPPSDTQLNQFKTLIKDVIQRANDLNVKKTKFKSIAMPLLGTGHIRDQ WLLTAIGAAVFDGIYRYSKSAKTSVKEIHLVNINEETTSAIRKIFLSEATGQLNQEDEERVTEMEERRRPHVDNPKEALT PLDVWKTNTKDKAAVDLKSCIIEKGNLAIIDDDDESDNSCHIRDQWLLTAIGGAVFDGIYRYSKSAKTSVKKIHLVNINE ETTSAIRKIFLSEATGQLNQEDEERVTEMEERRRPHVDNPKEALAPLDVWKTNTKDKAAVDLESCIIEKGNLAIIDDDDE SDNSCVVCMEPMDQPVALRNCGHQFCRDCILDYFSRKPSCPMCNTMYGKLYGDQPVDATANVYLDKSSLPGHEGHGTFII DYDIPDGRQNDQHPNPGMSYRGFRRRAYLPDTEEGQTVLHLLREAFNQGLIFTIGYSRTTGKDNVLTWNDIHHKTRKEGG PQRFGYPDPEYIPRVKEELAAKGIR |
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