Gene
| Gene Model ID | pfu_aug2.0_508.1_27488 |
|---|---|
| Locus | scaffold508.1 : 190446 ... 201360 : + |
| To GenomeBrowser | scaffold508.1:190446..201360 |
| Genes list of scaffold | scaffold508.1 |
| Synonym | pfu_aug1.0_9498.1_02757 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_508.1_27488.t1 | 2 | 1 | UAA | 36 | 136 | 5.1e-33 | 114.2 | 2.3e-25 | 1.7e-21 | 76.4 |
| pfu_aug2.0_508.1_27488.t1 | 2 | 2 | UAA | 136 | 212 | 5.1e-33 | 114.2 | 6.4e-14 | 4.7e-10 | 38.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_508.1_27488.t1 | gi|297272530|ref|XP_002800450.1| | PREDICTED: solute carrier family 35 member B1-like [Macaca mulatta] | 0.0 |
| pfu_aug2.0_508.1_27488.t1 | gi|597745488|ref|XP_007234774.1| | PREDICTED: solute carrier family 35 member B1 [Astyanax mexicanus] | 0.0 |
| pfu_aug2.0_508.1_27488.t1 | gi|543378639|ref|XP_005532520.1| | PREDICTED: solute carrier family 35 member B1 [Pseudopodoces humilis] | 0.0 |
| pfu_aug2.0_508.1_27488.t1 | gi|541971448|ref|XP_005439455.1| | PREDICTED: solute carrier family 35 member B1 [Falco cherrug] | 0.0 |
| pfu_aug2.0_508.1_27488.t1 | gi|505802723|ref|XP_004608739.1| | PREDICTED: solute carrier family 35 member B1 isoform X1 [Sorex araneus] | 1.4013e-45 |
Transcript
| Transcript ID | pfu_aug2.0_508.1_27488.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_508.1_27488.t1 atggtagaaaaaccccctcatggagaccccgagagtgtgataatagaaaaggaagaaaacagacacgtggagataaagaa agacatgtctgcgatcgacaaaaagctgctcttttgtgcagggggaactttcttgtgctatttttactatggcatcgttc aggaatcaataaccaaaggaaagtatggggaaggggaaaagcaagagaagttcaaatacactctatctttagtcttcatt caatgcattattaatgctattgcagcaaaaatagctatgtacttatggcagaaggagagagaccagacgcctagtcgtat gtacactatatgttccctgtcgtatttaggagctatgttagccagtaatcatgcacttcaacacgtcagctatccaactc agttggtgtccttgaccttggatggcgttaccggggcgacacaggagaacatgcgatctgtacataagacaggaccattc agtatgatgttatttgtcaatgtatggtcactactatggcttattataggtttgacgttgacaggggagggattggcttt cctagaattctttgaaagacatccatcaattttacctaaaatgatcacttttggtttggccagtgcagctggacagtact ga |
|
Protein
| Protein ID | pfu_aug2.0_508.1_27488.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_508.1_27488.t1 MVEKPPHGDPESVIIEKEENRHVEIKKDMSAIDKKLLFCAGGTFLCYFYYGIVQESITKGKYGEGEKQEKFKYTLSLVFI QCIINAIAAKIAMYLWQKERDQTPSRMYTICSLSYLGAMLASNHALQHVSYPTQLVSLTLDGVTGATQENMRSVHKTGPF SMMLFVNVWSLLWLIIGLTLTGEGLAFLEFFERHPSILPKMITFGLASAAGQY |
|