Gene
| Gene Model ID | pfu_aug2.0_509.1_30840 |
|---|---|
| Locus | scaffold509.1 : 196601 ... 216510 : - |
| To GenomeBrowser | scaffold509.1:196601..216510 |
| Genes list of scaffold | scaffold509.1 |
| Synonym | pfu_aug1.0_12005.1_32145 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_509.1_30840.t1 | 2 | 1 | RWD | 67 | 168 | 1.7e-14 | 53.6 | 3.8e-18 | 5.7e-14 | 51.9 |
| pfu_aug2.0_509.1_30840.t1 | 2 | 2 | RWD | 204 | 240 | 1.7e-14 | 53.6 | 0.11 | 1700.0 | -1.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_509.1_30840.t1 | gi|524914218|ref|XP_005111927.1| | PREDICTED: RWD domain-containing protein 4-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_509.1_30840.t1 | gi|676427950|ref|XP_009045115.1| | hypothetical protein LOTGIDRAFT_180040 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_509.1_30840.t1 | gi|195437819|ref|XP_002066837.1| | GK24690 [Drosophila willistoni] | 0.0 |
| pfu_aug2.0_509.1_30840.t1 | gi|195035527|ref|XP_001989229.1| | GH11608 [Drosophila grimshawi] | 0.0 |
| pfu_aug2.0_509.1_30840.t1 | gi|665801798|ref|XP_008548929.1| | PREDICTED: RWD domain-containing protein 4 [Microplitis demolitor] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_509.1_30840.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_509.1_30840.t1 atggaagtaaccggatgtgacagttctaccgaattgaagcgacgggtgttgcatgcaagcaggagatgcttactcttcct gggaacctggtcatactcccatatcgggagttcgcttctgnacggacgacgacggacgacgacgacggacgatggacgac agacgcaacactatggcaatagctcacttgagccattggctcaggaagagctggaagtgctacattctatatatgaagga gatgacaatttcaaagagataaattcaacttcttttcagtataagtatggagaggacggtaaccatagatcatttattgt ggaaatctcatggactgacacctatcctgatgatggaccccagatcaacttgaacacattttataataagcacatattgg atgctgtgaaggagacaattaaaggaggaatttcttcccagatccctgatttacttggctgtgccatgacatatacgttg tttgaatgggtaaaagagaacttagaagagctgctggaacagcaacctctgacacctgtaatagcctatcagtcagagga caaagaaacagtcagtgatgaaaaggatagaggtcttccaaatggagacagtaaaaagaaagagaagaaagaacaattat caaaaaatcaaaaacgaaaactgtacgatcgtctaaatgctgcaggtgaaagaccaagggggtggaactgggtggatgtt attaggcatctcagtcaaacaggatcagccaaataa |
|
Protein
| Protein ID | pfu_aug2.0_509.1_30840.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_509.1_30840.t1 MEVTGCDSSTELKRRVLHASRRCLLFLGTWSYSHIGSSLLXGRRRTTTTDDGRQTQHYGNSSLEPLAQEELEVLHSIYEG DDNFKEINSTSFQYKYGEDGNHRSFIVEISWTDTYPDDGPQINLNTFYNKHILDAVKETIKGGISSQIPDLLGCAMTYTL FEWVKENLEELLEQQPLTPVIAYQSEDKETVSDEKDRGLPNGDSKKKEKKEQLSKNQKRKLYDRLNAAGERPRGWNWVDV IRHLSQTGSAK |
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