Gene
| Gene Model ID | pfu_aug2.0_509.1_30843 |
|---|---|
| Locus | scaffold509.1 : 268320 ... 279750 : - |
| To GenomeBrowser | scaffold509.1:268320..279750 |
| Genes list of scaffold | scaffold509.1 |
| Synonym | pfu_aug1.0_8273.1_67834 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_509.1_30843.t1 | 1 | 1 | C1q | 50 | 177 | 2.2e-23 | 82.6 | 1.8e-27 | 2.7e-23 | 82.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_509.1_30843.t1 | gi|701313563|ref|XP_010017752.1| | PREDICTED: complement C1q tumor necrosis factor-related protein 4 [Nestor notabilis] | 1.0e-10 |
| pfu_aug2.0_509.1_30843.t1 | gi|327259669|ref|XP_003214658.1| | PREDICTED: complement C1q tumor necrosis factor-related protein 4 [Anolis carolinensis] | 3.0e-10 |
| pfu_aug2.0_509.1_30843.t1 | gi|37181873|gb|AAQ88740.1| | CTRP6 [Homo sapiens] | 4.0e-10 |
Transcript
| Transcript ID | pfu_aug2.0_509.1_30843.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_509.1_30843.t1 atgaaattgatgatcatcattgtgttggctgttcttggatccatccatgtcgaatcatgtgaggatgagaaaaagggaac ccttggtttgctgtcacagtgtattgatagacttggaggaaagcatgaagatcaacgaagaattgttgccttcgcagcag gaccatcaaatcctatcaaagatgtgttacatcaggctaccatcatcttcaataaggcaagcataaacacggatggtgtt tatgatccaaagtcgggaaagtttaccgctcccatggccggactttataagtttgattggacaatcctggtagagaatgg aaaatactgtgtcacatttttgatccacgaatcgaatgtacaaactgtagttggcagcaaccatccgggggacaaggacg actggagcacaggtactcaaacaactatcttagaattaaaatcaggagataaggtctggatacgagcaagaggagctaat tgtaaatatattgcgcaatttccatattccaccttcaatggatatatgctgtag |
|
Protein
| Protein ID | pfu_aug2.0_509.1_30843.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_509.1_30843.t1 MKLMIIIVLAVLGSIHVESCEDEKKGTLGLLSQCIDRLGGKHEDQRRIVAFAAGPSNPIKDVLHQATIIFNKASINTDGV YDPKSGKFTAPMAGLYKFDWTILVENGKYCVTFLIHESNVQTVVGSNHPGDKDDWSTGTQTTILELKSGDKVWIRARGAN CKYIAQFPYSTFNGYML |
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