Gene
| Gene Model ID | pfu_aug2.0_51.1_03498 |
|---|---|
| Locus | scaffold51.1 : 1 ... 15912 : + |
| To GenomeBrowser | scaffold51.1:1..15912 |
| Genes list of scaffold | scaffold51.1 |
| Synonym | pfu_aug1.0_786.1_65625 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_51.1_03498.t1 | 1 | 1 | Fibrinogen_C | 47 | 246 | 0.0 | 226.6 | 0.0 | 0.0 | 226.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_51.1_03498.t1 | gi|115618400|ref|XP_001188982.1| | 0.0 | |
| pfu_aug2.0_51.1_03498.t1 | gi|115618396|ref|XP_001188906.1| | 0.0 | |
| pfu_aug2.0_51.1_03498.t1 | gi|736232006|ref|XP_010782651.1| | PREDICTED: fibrinogen C domain-containing protein 1-like, partial [Notothenia coriiceps] | 0.0 |
| pfu_aug2.0_51.1_03498.t1 | gi|115891497|ref|XP_781712.2| | PREDICTED: ficolin-2 [Strongylocentrotus purpuratus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_51.1_03498.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_51.1_03498.t1 atcttataaagaaaggacatctgaatgtaaaaccaatttttgatgcagtcaagttggataaacctattgctttctcggtt acatacaagtatctcatcactgatggtaatccagatgataagatatatagtggttgtatggccttgaaaaataaggagag cggcgtttacaacatacgaatcgctgaaggatcgacagcaaaagtttactgcgatatgaccacggacggcgggggatgga cggtttttcaaagaagagttgatggatcacagaatttcaaacaaaactataatgcctatcgtaaaggatttggtaacatc aagaaagaattttggctaggcaatgagctgatccataaactgacagaggatggctcatgtgaacttcgtgtagacctgga ggatttcaaaaatgaaacaagatacgccttatataaaggtttcaaagttggagatgaaaataatggattcaaattgacat taggatcttacagtggcgatgcaggtgactcactctctcatgtcaatgggatgaaattttcaacatacgacaaggatcaa gatacatggggtagtaactgtgcatctacttatgctgcattttggcacagggcttgccattatgctaatctaaatggact atacttaaatggaaaaataacatcctatgctgacggaattatttggtaccactggagaggttattattactcactgaaac acacaaagatgatgtttcgctgcaagtaa |
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Protein
| Protein ID | pfu_aug2.0_51.1_03498.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_51.1_03498.t1 LIKKGHLNVKPIFDAVKLDKPIAFSVTYKYLITDGNPDDKIYSGCMALKNKESGVYNIRIAEGSTAKVYCDMTTDGGGWT VFQRRVDGSQNFKQNYNAYRKGFGNIKKEFWLGNELIHKLTEDGSCELRVDLEDFKNETRYALYKGFKVGDENNGFKLTL GSYSGDAGDSLSHVNGMKFSTYDKDQDTWGSNCASTYAAFWHRACHYANLNGLYLNGKITSYADGIIWYHWRGYYYSLKH TKMMFRCK |
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