Gene
| Gene Model ID | pfu_aug2.0_51.1_03501 |
|---|---|
| Locus | scaffold51.1 : 100256 ... 104773 : + |
| To GenomeBrowser | scaffold51.1:100256..104773 |
| Genes list of scaffold | scaffold51.1 |
| Synonym | pfu_aug1.0_201900.1_64775 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| alkylated dna repair protein alkb homolog 1 | GO:0006259 GO:0016491 GO:0030154 GO:0044710 GO:0050789 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_51.1_03501.t1 | 1 | 1 | 2OG-FeII_Oxy_2 | 80 | 215 | 6.3e-27 | 94.6 | 1.2e-30 | 8.7e-27 | 94.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_51.1_03501.t1 | gi|704336647|ref|XP_010173861.1| | PREDICTED: alkylated DNA repair protein alkB homolog 1, partial [Caprimulgus carolinensis] | 0.0 |
| pfu_aug2.0_51.1_03501.t1 | gi|677294439|gb|KFP76867.1| | Alkylated DNA repair protein alkB 1, partial [Apaloderma vittatum] | 0.0 |
| pfu_aug2.0_51.1_03501.t1 | gi|529448594|ref|XP_005243990.1| | PREDICTED: alkylated DNA repair protein alkB homolog 1 [Falco peregrinus] | 0.0 |
| pfu_aug2.0_51.1_03501.t1 | gi|699599042|ref|XP_009869291.1| | PREDICTED: alkylated DNA repair protein alkB homolog 1 [Apaloderma vittatum] | 0.0 |
| pfu_aug2.0_51.1_03501.t1 | gi|697030113|ref|XP_009577083.1| | PREDICTED: alkylated DNA repair protein alkB homolog 1, partial [Fulmarus glacialis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_51.1_03501.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_51.1_03501.t1 atgattagagagtacaacctccaaaaggtatctcatcctgcagtacatgggctcagggatgctgagtcatggaaagccta ctgtctggagggattcccaggtttcatcttcatcaacaacccttttaagcatggctgtcagaaatactggatagagcgat gtgtattggactttccacagagaccctgcaggacaaacctagatgtactgatggacacagaaaaactgggaaatatatgg gatacctgccagctgaaagaaggcaagcagatcacaggaaaagatagcttaatgatgaacttaagatgggtgaccatggg ctacaattatgaatggaatacaagagcttactatgatgagatgaaaacaccattcccaaatgatttgtgggaaatctgtc gatatgtagcagcagctataggatacccagaattctcagcggagactaccatcgttaactactaccacacggaccacggt acatgcagcatgggaccccataaagacatatctgaaatagatcatgatgctcccctactgtcatttagctttggtcaaga ttcattattcctgcttggaggtctagatcgtagtacaaagcctgtttgtttgtacatgcacagtggcgacatctgtatca tgagtaaggactgccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngactggtgtatc atgccatgccaaggatcctccgagctga |
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Protein
| Protein ID | pfu_aug2.0_51.1_03501.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_51.1_03501.t1 MIREYNLQKVSHPAVHGLRDAESWKAYCLEGFPGFIFINNPFKHGCQKYWIERCVLDFPQRPCRTNLDVLMDTEKLGNIW DTCQLKEGKQITGKDSLMMNLRWVTMGYNYEWNTRAYYDEMKTPFPNDLWEICRYVAAAIGYPEFSAETTIVNYYHTDHG TCSMGPHKDISEIDHDAPLLSFSFGQDSLFLLGGLDRSTKPVCLYMHSGDICIMSKDCXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXTGVSCHAKDPPS |
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