Gene
| Gene Model ID | pfu_aug2.0_51.1_03506 |
|---|---|
| Locus | scaffold51.1 : 189457 ... 205178 : - |
| To GenomeBrowser | scaffold51.1:189457..205178 |
| Genes list of scaffold | scaffold51.1 |
| Synonym | pfu_aug1.0_5751.1_02063 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_51.1_03506.t1 | 1 | 1 | ATP_bind_4 | 110 | 239 | 6.0e-30 | 104.2 | 1.4e-33 | 1.0e-29 | 103.5 |
| pfu_aug2.0_51.1_03506.t1 | 2 | 1 | Ribonuc_L-PSP | 321 | 417 | 4.3e-29 | 100.7 | 1.1e-15 | 8.4e-12 | 44.9 |
| pfu_aug2.0_51.1_03506.t1 | 2 | 2 | Ribonuc_L-PSP | 437 | 564 | 4.3e-29 | 100.7 | 2.2e-18 | 1.6e-14 | 53.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_51.1_03506.t1 | gi|524885209|ref|XP_005099215.1| | PREDICTED: diphthine--ammonia ligase-like isoform X2 [Aplysia californica] | 0.0 |
| pfu_aug2.0_51.1_03506.t1 | gi|524885207|ref|XP_005099214.1| | PREDICTED: diphthine--ammonia ligase-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_51.1_03506.t1 | gi|617372046|ref|XP_007576274.1| | PREDICTED: diphthine--ammonia ligase [Poecilia formosa] | 0.0 |
| pfu_aug2.0_51.1_03506.t1 | gi|658916496|ref|XP_008398017.1| | PREDICTED: diphthine--ammonia ligase isoform X2 [Poecilia reticulata] | 0.0 |
| pfu_aug2.0_51.1_03506.t1 | gi|658916493|ref|XP_008398016.1| | PREDICTED: diphthine--ammonia ligase isoform X1 [Poecilia reticulata] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_51.1_03506.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_51.1_03506.t1 atgtggcgaaatatggtcacttgctctacacttcaacaacatcgtctgcgaacctggcttatcttcctcttcaaagtagt tcacagtattgttgcaatttacccatcccacctccttattccacaagacacatgcactcctcactccaatccatcaggct tcaaacacattcacactcataaagacatctacaaatactccttctttccacatacaataacacaatggaacaaactaccc ccagacataacatcagcaccatcacttgaagcagccaaagagcaaagcaaacatgcctgctcttttgaacatatttttct agacaaccaggcaattgagaaacatgatatagaggccgtgtctgtaggtgctgtgttgtcagattatcagcgtgttagag tagaaaatgtctgtcagagacttggtttgacatcactaggctatctgtggagaaggaaccaagcagaacttctaaatgag atgattcagtgtggggtagaggccatcctcataaaagtagcttccttaggtttatcaccaaagaaacatcttgggaaatc attagaagagatgcaagaagaactgatgtacatgcatgacaagtatgagttgaatgtctgtggggaaggtggagagtacg agacatttacactggactgtcctctcttcaacaagaaaattgtattggacagtgtagaaacagtgatgcattcagatgat gcctttgctccagttggttacctcaaccttataaaagcccacttagaagataaagaaattgatcagtcattgtcattcaa ggaaagattggcacatttaccgatgaagagaagcagtgacgtaacatttataaaatcatctgacgagtttgctccatgtc tcctattctactcacttgcaaatgttgatttctcttgcaagacacaaaaaatttcagatgatatagagccacaaataaaa caaaaaaataacgatgtgtggatttctggtataattggtaaatactcagccaatgagagtcttcgggacataaccttgac ggccatggagcagctgaaatccatgttgataagcctagggaagggatggaacatgtcatgtctggtctatgtacacctct atgtacagaatatggcagactttgctgaaatcaatgctgtctaccggacatactttggtatcaacccacctgccagggta tgtgtacaggcccagcttccaaaagacgtagcagttcaaatagattgctatggaaaccatgatattaaatcaaggcagac catgcatgttcagggactgtcacattgggcacctgctaatataggaccctacagtcagtgtgtcaaggtgaaaaacagac tgtatgtagcaggtcagatacctctagtgccgggctctatgaagatccttaaacaaggcatccaagctgaggccaaacta gcgttacaacatgtcagtcgtgtactaaacgccatgcatcccgagtgtactatcgcagatactagtcatgtcgtgtgtta tgtaactcaccctcagtatgtagaggtggtcagactggaatggatcaaatacttatctaattattacacgacagagacag aaatgttgaagcaacaaccccaagtgacttatgtgattgtacctgccctgccccgcggagcgtctgtggagtggcaagta acggctaccgtcgacagaccatatagaagcgatgaccggcccagtaattgtaatattacctttgaagaaggcgaaaagat tccagattgttctttcccacagtatggagctcgtatgtcagagctgggatgtcactgtaacgatacagaatcagaggagg atgtagaaacagacaaatattttttcttcagcctttatatgcacaaaagtattcaggagatatgtaccggtaccatagcc gatacactgtgcggtgttatcaagtctggtctagagaatagtggtaaagatgtctgcttgccattattacgcatcttctt tatggcctctctgattgactacaatgacctacacaatgctcaactcgacgaagctgagtga |
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Protein
| Protein ID | pfu_aug2.0_51.1_03506.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_51.1_03506.t1 MWRNMVTCSTLQQHRLRTWLIFLFKVVHSIVAIYPSHLLIPQDTCTPHSNPSGFKHIHTHKDIYKYSFFPHTITQWNKLP PDITSAPSLEAAKEQSKHACSFEHIFLDNQAIEKHDIEAVSVGAVLSDYQRVRVENVCQRLGLTSLGYLWRRNQAELLNE MIQCGVEAILIKVASLGLSPKKHLGKSLEEMQEELMYMHDKYELNVCGEGGEYETFTLDCPLFNKKIVLDSVETVMHSDD AFAPVGYLNLIKAHLEDKEIDQSLSFKERLAHLPMKRSSDVTFIKSSDEFAPCLLFYSLANVDFSCKTQKISDDIEPQIK QKNNDVWISGIIGKYSANESLRDITLTAMEQLKSMLISLGKGWNMSCLVYVHLYVQNMADFAEINAVYRTYFGINPPARV CVQAQLPKDVAVQIDCYGNHDIKSRQTMHVQGLSHWAPANIGPYSQCVKVKNRLYVAGQIPLVPGSMKILKQGIQAEAKL ALQHVSRVLNAMHPECTIADTSHVVCYVTHPQYVEVVRLEWIKYLSNYYTTETEMLKQQPQVTYVIVPALPRGASVEWQV TATVDRPYRSDDRPSNCNITFEEGEKIPDCSFPQYGARMSELGCHCNDTESEEDVETDKYFFFSLYMHKSIQEICTGTIA DTLCGVIKSGLENSGKDVCLPLLRIFFMASLIDYNDLHNAQLDEAE |
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