Gene
| Gene Model ID | pfu_aug2.0_51.1_03507 |
|---|---|
| Locus | scaffold51.1 : 209499 ... 218349 : + |
| To GenomeBrowser | scaffold51.1:209499..218349 |
| Genes list of scaffold | scaffold51.1 |
| Synonym | pfu_aug1.0_782.1_58242 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_51.1_03507.t1 | 3 | 1 | Golgin_A5 | 12 | 120 | 0.0 | 312.4 | 0.023 | 29.0 | 3.0 |
| pfu_aug2.0_51.1_03507.t1 | 3 | 2 | Golgin_A5 | 340 | 546 | 0.0 | 312.4 | 1.9e-19 | 2.4e-16 | 59.3 |
| pfu_aug2.0_51.1_03507.t1 | 3 | 3 | Golgin_A5 | 543 | 912 | 0.0 | 312.4 | 0.0 | 0.0 | 261.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_51.1_03507.t1 | gi|524885201|ref|XP_005099211.1| | PREDICTED: golgin subfamily A member 5-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_51.1_03507.t1 | gi|676433808|ref|XP_009047021.1| | hypothetical protein LOTGIDRAFT_82054, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_51.1_03507.t1 | gi|390339614|ref|XP_785735.3| | PREDICTED: golgin subfamily A member 5 [Strongylocentrotus purpuratus] | 0.0 |
| pfu_aug2.0_51.1_03507.t1 | gi|585683174|ref|XP_006812377.1| | PREDICTED: golgin subfamily A member 5-like isoform X2 [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_51.1_03507.t1 | gi|585683170|ref|XP_006812376.1| | PREDICTED: golgin subfamily A member 5-like isoform X1 [Saccoglossus kowalevskii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_51.1_03507.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_51.1_03507.t1 atgtcatggttaagtaatatcacagggaaagctgaggagttcctcaacaaaattgaccagtcagccgctcaggcactaca taaagaggaggaagaacagagattgaacctctctctgcccctcactagggaagtcacctcattggggtcaccaccttctt catcaagggaccacaatgtagatagagcggcatatagtgtgccatctaagacaacttttaagaaagacaattctgcatca tcttttgtttctaccccgataaaagcgaacaaagcagcacctttagtgggatcaagtggtgtggctaaacagactggtaa ggtaactgtaaaacctccagctgactctgtgaccaaacaggcatcaagtactgggccgcagggagctggcacacaagaac agaaaacatcctctgctagtgcacctgctaagaagaaattagacactgatgaagctctttttgatttcctgaacagcagt gagccattggaggctaacaaaaagaaagcagcccctcctccctctgtggttgacccccctcgtcattctcgtcagtctag cacgtcatctgtggtgtctaacaaggggggtaaaagtaatgcagacacaccagtttctacaagtggatcatccatagtcc atgtggatgccttgcctctagacagtgacagaggtagtccttccgagcctgatggttctgcggacgttctagctctggct gatgctatgatggaacagagtccaagtaatagtgttagcagtaaccaagatggcgatcattctgncagacacaccagttt ctacaagtggatcatccatagtccatgtggatgccttgcctctagtgacagaggtagtccttccgagcctgatggttctg cggacgttctagctctggctgatgctatgatggaacagagtccaagtaatagtgttagcagtaaccaagatggcgatcat tctgcggaacttaatcagaaaatatcgtctctggagcttgagaataaacttctgaagaatgaggtggcgtctctcaacca ggagatggctactgtgttacagagatctaaagactcacagtccgatttacatagattacgtatgaagttggatgactaca acagatcagcatcagtaagtgaccagatggtacgagagcttcagtctcgggaatcagacctgatggaggctctacaagcc aaggactcccaattagctgtactcagagtgaggctggaggaggctgacaaggaaatggagtccaaacagaggagtataag taatctggaaaaccagagggaaaggatactgaaggaccatacagattccagtggtgtacatagccaggctctggactcat taaaacagaaacttgtagaggtggagggggccctcaggagggaacaggaggctctcaagaaaatacagcaagaatcttct gacagacagagtcgattggaacaagaacagaaaagtttggcagagtctctaactgcagcagagaggcgtgtcaatgaaga aagggcaaaggcatcagacttgtccaatcagctgaagacagcaaagacccaatcagagaacgcgaaacaagaactcacag actacaaggagaaagctaccaggatactacaagaccatacagattccagtggtgtacatagccaggctctcgactcatta aaacagaaacttgtagaggtggagggggccctcaggagggaacaggaggctctcaagaaaatacagcaagaatcttctga cagacagagtcgattggaacaagaacagaaaagtttggcagagtctctaactgcagcagagaggcgtgtcaatgaagaaa gggcaaaggcatcagacttgtccaatcagctgaagacagcaaagacccaatcagagaacgcgaaacaagaactcacagac tacaaggagaaagctaccaggatactacaatctaaggagagattgattgcaagtttacgtgagggatcaggagcttctgg agaggcagtgggtgtgtcgagccttgagtatgactcggtcaaacaggagagggatatgtttaaggaggaactacagcaga ctaaaatgaccatggaaaacctcaggatggaattgtcggatttagaagcccagttacaacaggacagtgacacagctaat gatcagatcagctcgttagaggaatcgttacgacacgagaggaggaaatgtgaggacgcagaacaagaactcctcagaca aaaacaggaattacaatacagcttagaagagacaaggaaacagaaaactacattccagacatgtatcagtgacagagagg cagagatagaaagactacgaaatcagattatgaccaagtcgatgagttcatctacagaaactgagttagaatctcgagtg aaaactctgaccgagtcactgatacagaaacagaccatgttagagaccctgggtacagagaaaaactccttagctctaca actagaaaggacacaggacatccaaagttcctctctccgcaccaacactgtggtccatgtccatgatgatgatgaagtac gtcagagactgcctgcctttatgagagagacgcctacagaccatgaagttgtcaagaaaatgaaaggagcagctaatact atcgacaaatttagcatcagacttggtgttttcttcagaagaaatcctatggcacgagtgtttgtgatcttgtatatggt gttgttacatttgtgggtgatggttgtgttactgacatatcagccagagatgcacggtgccgacttcaaacaaccacaag accccgctgttggctcacctcactga |
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Protein
| Protein ID | pfu_aug2.0_51.1_03507.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_51.1_03507.t1 MSWLSNITGKAEEFLNKIDQSAAQALHKEEEEQRLNLSLPLTREVTSLGSPPSSSRDHNVDRAAYSVPSKTTFKKDNSAS SFVSTPIKANKAAPLVGSSGVAKQTGKVTVKPPADSVTKQASSTGPQGAGTQEQKTSSASAPAKKKLDTDEALFDFLNSS EPLEANKKKAAPPPSVVDPPRHSRQSSTSSVVSNKGGKSNADTPVSTSGSSIVHVDALPLDSDRGSPSEPDGSADVLALA DAMMEQSPSNSVSSNQDGDHSXRHTSFYKWIIHSPCGCLASSDRGSPSEPDGSADVLALADAMMEQSPSNSVSSNQDGDH SAELNQKISSLELENKLLKNEVASLNQEMATVLQRSKDSQSDLHRLRMKLDDYNRSASVSDQMVRELQSRESDLMEALQA KDSQLAVLRVRLEEADKEMESKQRSISNLENQRERILKDHTDSSGVHSQALDSLKQKLVEVEGALRREQEALKKIQQESS DRQSRLEQEQKSLAESLTAAERRVNEERAKASDLSNQLKTAKTQSENAKQELTDYKEKATRILQDHTDSSGVHSQALDSL KQKLVEVEGALRREQEALKKIQQESSDRQSRLEQEQKSLAESLTAAERRVNEERAKASDLSNQLKTAKTQSENAKQELTD YKEKATRILQSKERLIASLREGSGASGEAVGVSSLEYDSVKQERDMFKEELQQTKMTMENLRMELSDLEAQLQQDSDTAN DQISSLEESLRHERRKCEDAEQELLRQKQELQYSLEETRKQKTTFQTCISDREAEIERLRNQIMTKSMSSSTETELESRV KTLTESLIQKQTMLETLGTEKNSLALQLERTQDIQSSSLRTNTVVHVHDDDEVRQRLPAFMRETPTDHEVVKKMKGAANT IDKFSIRLGVFFRRNPMARVFVILYMVLLHLWVMVVLLTYQPEMHGADFKQPQDPAVGSPH |
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