Gene
Gene Model ID | pfu_aug2.0_51.1_03508 |
---|---|
Locus | scaffold51.1 : 220590 ... 226268 : - |
To GenomeBrowser | scaffold51.1:220590..226268 |
Genes list of scaffold | scaffold51.1 |
Synonym | pfu_aug1.0_782.1_58243 |
Manual annotation
Annotation by Blast2GO
Annotation | GO |
---|---|
beta-soluble nsf attachment isoform x3 | GO:0005483 GO:0005774 GO:0006886 GO:0019905 GO:0031201 GO:0035494 GO:0045494 GO:0061025 GO:0070062 |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_51.1_03508.t1 | 1 | 1 | SNAP | 1 | 82 | 9.6e-29 | 100.3 | 1.2e-31 | 1.0e-28 | 100.3 |
pfu_aug2.0_51.1_03508.t1 | 1 | 1 | TPR_12 | 9 | 75 | 5.2e-08 | 32.7 | 7.6e-11 | 6.7e-08 | 32.3 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug2.0_51.1_03508.t1 | gi|123701145|ref|NP_001074171.1| | N-ethylmaleimide-sensitive factor attachment protein, beta [Danio rerio] | 2.0e-38 |
pfu_aug2.0_51.1_03508.t1 | gi|573875352|ref|XP_006626003.1| | PREDICTED: beta-soluble NSF attachment protein-like isoform X3 [Lepisosteus oculatus] | 3.0e-38 |
pfu_aug2.0_51.1_03508.t1 | gi|701328353|ref|XP_009976512.1| | PREDICTED: beta-soluble NSF attachment protein, partial [Tauraco erythrolophus] | 4.0e-38 |
pfu_aug2.0_51.1_03508.t1 | gi|557298456|ref|XP_006031503.1| | PREDICTED: alpha-soluble NSF attachment protein [Alligator sinensis] | 5.0e-38 |
pfu_aug2.0_51.1_03508.t1 | gi|119630560|gb|EAX10155.1| | N-ethylmaleimide-sensitive factor attachment protein, beta, isoform CRA_f, partial [Homo sapiens] | 5.0e-38 |
Transcript
Transcript ID | pfu_aug2.0_51.1_03508.t1 |
---|---|
Definition | - |
>pfu_aug2.0_51.1_03508.t1 atgggtaaatttacaattgctgcaaaacatcacataacgatagcagaggtttatgagacagagttagtggacctggaaaa agccataactcactacgagcaggctgctgattattataaaggagaggaatcaaacagttcagcaaataaatgtctggtga aagttgcacagtattcagctcaactggaacaatatgacaaagcaatacagatttacgaagaggtacaccattataaagtg acaaatttctga |
Protein
Protein ID | pfu_aug2.0_51.1_03508.t1 |
---|---|
Definition | - |
>pfu_aug2.0_51.1_03508.t1 MGKFTIAAKHHITIAEVYETELVDLEKAITHYEQAADYYKGEESNSSANKCLVKVAQYSAQLEQYDKAIQIYEEVHHYKV TNF |