Gene
| Gene Model ID | pfu_aug2.0_51.1_03509 |
|---|---|
| Locus | scaffold51.1 : 231329 ... 257806 : + |
| To GenomeBrowser | scaffold51.1:231329..257806 |
| Genes list of scaffold | scaffold51.1 |
| Synonym | pfu_aug1.0_782.1_58244 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_51.1_03509.t1 | 4 | 1 | fn3 | 99 | 168 | 8.6e-07 | 29.0 | 4.8e-08 | 0.00024 | 21.1 |
| pfu_aug2.0_51.1_03509.t1 | 4 | 2 | fn3 | 273 | 287 | 8.6e-07 | 29.0 | 1.7 | 8300.0 | -3.0 |
| pfu_aug2.0_51.1_03509.t1 | 4 | 3 | fn3 | 333 | 363 | 8.6e-07 | 29.0 | 0.008 | 40.0 | 4.4 |
| pfu_aug2.0_51.1_03509.t1 | 4 | 4 | fn3 | 454 | 503 | 8.6e-07 | 29.0 | 0.024 | 120.0 | 2.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_51.1_03509.t1 | gi|524910732|ref|XP_005110240.1| | PREDICTED: fibroblast growth factor receptor 4-like [Aplysia californica] | 2.0e-10 |
| pfu_aug2.0_51.1_03509.t1 | gi|115898435|ref|XP_787331.2| | 5.0e-06 | |
| pfu_aug2.0_51.1_03509.t1 | gi|585723260|ref|XP_006813611.1| | PREDICTED: proto-oncogene tyrosine-protein kinase receptor Ret-like [Saccoglossus kowalevskii] | 7.0e-06 |
Transcript
| Transcript ID | pfu_aug2.0_51.1_03509.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_51.1_03509.t1 atgattttgaggatattttatgtttttgtgggagttttgatattttctttgattaaggatgtagcagcttttaattatga tacccagacgagtagggagttatgtgaaacacagtgcaccgctctttgttttgaaaatcagacggaatgtgtcaaatgtc aagaacgatacctgacttccagatggattgcaaactgtgaaacagagggatgtaaaggaggctgtgactttttacagcgt cattacagtccaccagatttcctagatttaccaactatcccggatgtgatgacatttttggcgggaaccaatgtttttgt ttcctggagtgcgtcctcttcctccacctctgtactgtatgtcctccaaatgaaacgggacaacaatccatggacaactg tgatgtcaaaggtgacaaatacaacttatgaagtggatataccagatatctgtgctaaatacaagttccgtgttatggcc atcaacaatgtaggctcaaatgggttttctatgccagcagtggtaccagacataatgccaggtccacttaccaatgtgac ttacgtgggaaatggtatttattactaccccatgacaggggacttcgctggcattgtacaactagatttaccacaaggat gggatgattcttcgttgagttttgagtttgatgataatccaagtatgcaatgtccttcgctctacaatgttccaaaacta gaattcatgtccttagcccctaggaatatgacgactcatattcagcatgccgttggagtcaaagttcacggtgatggatt tggctgtgtcttccattccagggtgcgagcggtgtcaagatgtggagtgaaaggaatgtggacaaatgtaactgtaaatc taaaagattgctttggaataaagagtttcccctgttcctccattcagattccatttaacccaccaggaaacgttaagaac gtaacgctgagagcagatttacattacgtccaagcacgtttacgtatcaactggtcaccaccggacgaccttggtagttc tggcatacttgaccactacttgatgcgctggggaaaggtccgactacctcgaccagaagatctactagcacagcctaaat acattgaggatagtcaaaccaagctagataggacaataatagaatttgaagtttgggtaccgaaagagaatgacacttcg tacggatttcagattgttccattagcaccaaaccagccttttaagagtgagagttggggattatttcagctttttacaat accaataaagtacgacagtaatcatcatcaccatacaaatgggacatcaacaggacatcctctcagtgaccaggatgtca gcatagtacaaataccaaattccctaaacatcagtgttatatggagttatgcagaattcaacaaatcaaaaagaagtttt aacgaccattatcttgtacagtacggagaagtcgattctgaaaatgcacagtcgttccgatctaataacacatgcaccaa gatcatatcgccgttcaagcaggaaataatggcttccatatactactcagtgtacattatggacgacgctccattgctct tatcactgaacaaaagtcatactctttacggaattaagattcttggatatccgttaggcacagaggatgatggaatggac gaagaaagggaaaatgaaacgatgttcacgttttccctggatgaaccaaacataacaggtacatccatcgaaaaaggtga atcaagcagcgatgagctgttgggacttgccgttctttgtggtgttctggcggctaccgttctgattgtggctgtagtat gtcggctgcatcggtacaagagaaagaaactctccagtctacatcagaggatattggataactcagacataatgacaaac ccgtacaacttggtacagaaaagaccgatagatgttttaaggactcggtccttttcaccaccagtggttcctgacgcatg ggaggttccacatagctgtgttaaagtggggagaactttgggaaaaggagcctttggagaggttctaaaaggcagggtat ccgccagcatccttaaacatcgcaatgttaaagtagagtcggataaggcatgtggactgcatgttcctgtggcagtcaaa atgctgaaaggtggaacgaatactagtcaaactgaaagcttcctaatccaggataataacacaattggcttcttgtgtgg caaatggccgtctaaagtcggcaccggttgcccattggtctcgtcggattatgtgtag |
|
Protein
| Protein ID | pfu_aug2.0_51.1_03509.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_51.1_03509.t1 MILRIFYVFVGVLIFSLIKDVAAFNYDTQTSRELCETQCTALCFENQTECVKCQERYLTSRWIANCETEGCKGGCDFLQR HYSPPDFLDLPTIPDVMTFLAGTNVFVSWSASSSSTSVLYVLQMKRDNNPWTTVMSKVTNTTYEVDIPDICAKYKFRVMA INNVGSNGFSMPAVVPDIMPGPLTNVTYVGNGIYYYPMTGDFAGIVQLDLPQGWDDSSLSFEFDDNPSMQCPSLYNVPKL EFMSLAPRNMTTHIQHAVGVKVHGDGFGCVFHSRVRAVSRCGVKGMWTNVTVNLKDCFGIKSFPCSSIQIPFNPPGNVKN VTLRADLHYVQARLRINWSPPDDLGSSGILDHYLMRWGKVRLPRPEDLLAQPKYIEDSQTKLDRTIIEFEVWVPKENDTS YGFQIVPLAPNQPFKSESWGLFQLFTIPIKYDSNHHHHTNGTSTGHPLSDQDVSIVQIPNSLNISVIWSYAEFNKSKRSF NDHYLVQYGEVDSENAQSFRSNNTCTKIISPFKQEIMASIYYSVYIMDDAPLLLSLNKSHTLYGIKILGYPLGTEDDGMD EERENETMFTFSLDEPNITGTSIEKGESSSDELLGLAVLCGVLAATVLIVAVVCRLHRYKRKKLSSLHQRILDNSDIMTN PYNLVQKRPIDVLRTRSFSPPVVPDAWEVPHSCVKVGRTLGKGAFGEVLKGRVSASILKHRNVKVESDKACGLHVPVAVK MLKGGTNTSQTESFLIQDNNTIGFLCGKWPSKVGTGCPLVSSDYV |
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