Gene
| Gene Model ID | pfu_aug2.0_51.1_03514 |
|---|---|
| Locus | scaffold51.1 : 338653 ... 342738 : - |
| To GenomeBrowser | scaffold51.1:338653..342738 |
| Genes list of scaffold | scaffold51.1 |
| Synonym | pfu_aug1.0_790.1_51081 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| bone morphogenetic protein 4 | GO:0001837 GO:0001934 GO:0003007 GO:0005615 GO:0005737 GO:0006950 GO:0008083 GO:0009968 GO:0010629 GO:0010894 GO:0019904 GO:0030111 GO:0030282 GO:0030509 GO:0030900 GO:0031327 GO:0031988 GO:0032526 GO:0035051 GO:0035295 GO:0042127 GO:0042476 GO:0042698 GO:0042803 GO:0043234 GO:0043410 GO:0045778 GO:0045944 GO:0048729 GO:0048738 GO:0050769 GO:0051216 GO:0060429 GO:0061061 GO:0065008 GO:0071260 GO:0071773 GO:2000027 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_51.1_03514.t1 | 1 | 1 | TGFb_propeptide | 50 | 287 | 0.0 | 230.5 | 0.0 | 0.0 | 229.9 |
| pfu_aug2.0_51.1_03514.t1 | 1 | 1 | TGF_beta | 344 | 447 | 6.7e-40 | 135.6 | 4.30199e-43 | 1.6e-39 | 134.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_51.1_03514.t1 | gi|260803962|ref|XP_002596858.1| | hypothetical protein BRAFLDRAFT_129112 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_51.1_03514.t1 | gi|585723198|ref|XP_006813602.1| | PREDICTED: bone morphogenetic protein 2/4 isoform X1 [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_51.1_03514.t1 | gi|259013360|ref|NP_001158387.1| | bone morphogenetic protein 2/4 precursor [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_51.1_03514.t1 | gi|663283352|ref|XP_008499237.1| | PREDICTED: bone morphogenetic protein 4 isoform X1 [Calypte anna] | 0.0 |
| pfu_aug2.0_51.1_03514.t1 | gi|676485676|ref|XP_009063729.1| | hypothetical protein LOTGIDRAFT_205842 [Lottia gigantea] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_51.1_03514.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_51.1_03514.t1 atgatttacggatttggacattacctggtgctagcgtcgtgcctgctggcttgtggacattcttcaattacgtcacaacc ggaagtgaaagtagatgaatctcgaccccaatcagaagatcaagctgaaaatatttttcctccaaatgttgacgaaaaac aaaaacaagacattatcaaagcatttgaagctagtttattgggagtatttggattgaaagaacgtccaaaacctaacaaa gacttaaaaattcctcagtacttattagacttgtataagaaacacagcgatgacccagattcactttccgaaagtttgtc agtgaagagacgtggggtgggatcagcaaatactgttagaagctttttccataaagaatctcgggagggcgtcgtgcaaa tgagcgaatgttcaaacgaaaactgtgcccaattcttgtttaatgttacctcaatacctcaggatgaagtgctgacaggc gcggagctacgagtatatgttgacagagacaacacttctagtgctaacgattctaattttcaaatgagaaagcagtttcg tcatagaatagaaattcatgaagtgatgatgccctcaaaaaatggcggcgaagccataacgaggctactggacacgagat atgtacagtcacgaaacgcctcctcgtggcacgcttttgatatccatcccgcagtattaaagtggaaaaagacacctcaa tataatcatggtttacaaatacgagtattaccgtataaaagcaaaccgtcctcacattctgtgaaacacgtgcgattacg tagatctacggaattatccgaaaacgagtggcatactcaaagaccattattagtgacttatacagacgacaatcgcggtc gaagaactaaaagacaaacaaaaaacgataaagacgataaaagaagaaatagaaaaaggaggaggcggaggaaaaataga cgacgaaaaaataagaggaaaaataagaagaatagaaaaaataataaaacaaaaagaaagaagtacaccgatgcgtgtaa aagaaaaccattatatgttgacttcaaagcagtggggtggaatgactggatttttgcacctcctggatacgaagcttatt attgtcatgggtcatgtaactggccgtatgacgatcatatgaacgtcacaaaccatgcaatagtgcaggacttagtgaat tctataaacccagggtcagtacccaaaccttgctgtgtacccacagaacttagctctctttcattgttatataccgacga acatgaagttgtcgtcttaaaagtttatcccgatatggttgttgaaggatgcggatgtcggtag |
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Protein
| Protein ID | pfu_aug2.0_51.1_03514.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_51.1_03514.t1 MIYGFGHYLVLASCLLACGHSSITSQPEVKVDESRPQSEDQAENIFPPNVDEKQKQDIIKAFEASLLGVFGLKERPKPNK DLKIPQYLLDLYKKHSDDPDSLSESLSVKRRGVGSANTVRSFFHKESREGVVQMSECSNENCAQFLFNVTSIPQDEVLTG AELRVYVDRDNTSSANDSNFQMRKQFRHRIEIHEVMMPSKNGGEAITRLLDTRYVQSRNASSWHAFDIHPAVLKWKKTPQ YNHGLQIRVLPYKSKPSSHSVKHVRLRRSTELSENEWHTQRPLLVTYTDDNRGRRTKRQTKNDKDDKRRNRKRRRRRKNR RRKNKRKNKKNRKNNKTKRKKYTDACKRKPLYVDFKAVGWNDWIFAPPGYEAYYCHGSCNWPYDDHMNVTNHAIVQDLVN SINPGSVPKPCCVPTELSSLSLLYTDEHEVVVLKVYPDMVVEGCGCR |
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