Gene
| Gene Model ID | pfu_aug2.0_51.1_03517 |
|---|---|
| Locus | scaffold51.1 : 398008 ... 422752 : - |
| To GenomeBrowser | scaffold51.1:398008..422752 |
| Genes list of scaffold | scaffold51.1 |
| Synonym | pfu_aug1.0_29245.1_40758 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_51.1_03517.t3 | 2 | 1 | DUF4508 | 54 | 102 | 9.6e-06 | 25.5 | 6.0e-07 | 0.0018 | 18.2 |
| pfu_aug2.0_51.1_03517.t3 | 2 | 2 | DUF4508 | 340 | 379 | 9.6e-06 | 25.5 | 0.0034 | 10.0 | 6.2 |
| pfu_aug2.0_51.1_03517.t3 | 1 | 1 | F-box-like | 390 | 431 | 3.6e-13 | 48.9 | 3.8e-16 | 1.1e-12 | 47.4 |
| pfu_aug2.0_51.1_03517.t3 | 1 | 1 | F-box | 390 | 435 | 8.7e-07 | 28.4 | 6.5e-10 | 1.9e-06 | 27.3 |
| pfu_aug2.0_51.1_03517.t3 | 4 | 1 | WD40 | 743 | 771 | 1.6e-22 | 78.4 | 7.7e-07 | 0.0023 | 17.7 |
| pfu_aug2.0_51.1_03517.t3 | 4 | 2 | WD40 | 775 | 811 | 1.6e-22 | 78.4 | 9.1e-12 | 2.7e-08 | 33.3 |
| pfu_aug2.0_51.1_03517.t3 | 4 | 3 | WD40 | 830 | 842 | 1.6e-22 | 78.4 | 2.4e-05 | 0.071 | 13.0 |
| pfu_aug2.0_51.1_03517.t3 | 4 | 4 | WD40 | 850 | 876 | 1.6e-22 | 78.4 | 6.7e-07 | 0.002 | 17.9 |
Transcript
| Transcript ID | pfu_aug2.0_51.1_03517.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_51.1_03517.t1 atgcctgccaccatcgtgcctataaacctgactcggagctattcccttaggaatcccgatggcttacggtacggtaactt tgagggtatggtccacttacctccccttaccaggagcagcaaacccatagaacaggtcaacttctccaaattcaacaatg aacagatatatagaactatatgtgaatggtttgaatcatggagagcttggcaacaaagaacacttctctatggaattgtt gacaggtgtaataccagacagctggacatattgtcaacaacattagaacctgtcagacatcgggattatgctgctgcgta taaaatgcctgttattgaggagaaagtgatgttttctaatgccaccactctgtctccactcgcagcttttgctgatgatg tggccacgaacatcataaagaatgccattgatgaagttatagcaccactgaaaaaaaaagataagaaaacagaagaatct gataaagaagttcaaccttcaagtttacagactgaagaaaagaaaagaaatgtagcaaatgataaacctgaaacaatctc ctcaggtcaggatcatgagtctgtattttctggagcaaaaatagaaaggaaacttgtaccttctataaagcgatcaaatt ctatgccgcgtgagttaggtaacgtgaggattctgacaccgaggagtttagagacagccctaatgcagcatcaaggagga cttactcgcagcgtgtctaacatctcacagaggagtgcttcagagatgagatacagactgtttgggtcccagaccaccgt cagtacacctgacttcttctccaaaactggtcttgtcaggcaaggttccatgcagagagagattaggtttggtcctataa ggaggcctaaaaaattacaggatatccccatctccttacagaggtcatttaagggggtcaagtggtggccagtggaacca caaacaggacatgtctttgtcaaggccaagaaacaggaactcatatctaacttcaaggagcaacttcaacaaatctggaa ttggttagatctatgggaagattatgagaagttgaatttactaaaggagatacttaaactggccagttctgaagtactca gtacactctatcattatatacatcaaaggttacgagatcatcgtgatataaacaggcttcctgataagttactgctgtat atattctctttactgtcacctgaccctgacatcaggtcatgctcccaggtgtgtagaagatggagatatttgtgtgccgt agacagcctgtggatgataaagtgtcatgaactagggttgatagaggggattgagaatatggagcagttggtattacagg caaacacacatcacatgggtattgactggaaactggcgtaccaggaactcaaacgtatcaccatacaaatgaaatatgag gaagaaaagaaagtgcgggcagcctttgcagaagctgagaggttgaggaagaagaaagaggcagaggaaggagacattag ccctgactttatatcagagaaatctgttagcattgtactagacagtaatgacatcttggagcaatataaaaagctgtttc attacgatgagtatactccgcccgaatcagaagaatccactccaaggaaagtgtcaacaggtcaagttgaaattgacgta aagcgtgctacacaagctgcactagaaagagaagaaagactccgaaaagagcaggcggccaaaaagaggaaggacaagtt ttcgatgcgagtgagacttcctccaagtaaggaggacggtcaggaggatggagatgccgtcagtacggtgtcctcggaga atctgtcagagagggactttatatttgaggccaaggatgaggacaatgaggatgttgatgaggaagagttagtgaagact cagcctgagatgacatggaagcacctgacccccagggaaggggataaacccaaggagctagagaggatccaaaaggagca gaaaacggacatggctaaacatgctaaggacgagagggatcggaaaatacggaaggagcaggaaaagttactggatatag agagggaaagattcaaattacataggacaaagactgatgtcagaggaataagaaaagaaaaagaagaggaaaactttaaa agaagatcttttttttacaaaggaattttagaatctagatatttcaccaagtccaatcaaaagtaa |
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| Transcript ID | pfu_aug2.0_51.1_03517.t2 |
| Definition | - |
>pfu_aug2.0_51.1_03517.t2 atgcctgccaccatcgtgcctataaacctgactcggagctattcccttaggaatcccgatggcttacggtacggtaactt tgagggtatggtccacttacctccccttaccaggagcagcaaacccatagaacaggtcaacttctccaaattcaacaatg aacagatatatagaactatatgtgaatggtttgaatcatggagagcttggcaacaaagaacacttctctatggaattgtt gacaggtgtaataccagacagctggacatattgtcaacaacattagaacctgtcagacatcgggattatgctgctgcgta taaaatgcctgttattgaggagaaagtgatgttttctaatgccaccactctgtctccactcgcagcttttgctgatgatg tggccacgaacatcataaagaatgccattgatgaagttatagcaccactgaaaaaaaaagataagaaaacagaagaatct gataaagaagttcaaccttcaagtttacagactgaagaaaagaaaagaaatgtagcaaatgataaacctgaaacaatctc ctcaggtcaggatcatgagtctgtattttctggagcaaaaatagaaaggaaacttgtaccttctataaagcgatcaaatt ctatgccgcgtgagttaggtaacgtgaggattctgacaccgaggagtttagagacagccctaatgcagcatcaaggagga cttactcgcagcgtgtctaacatctcacagaggagtgcttcagagatgagatacagactgtttgggtcccagaccaccgt cagtacacctgacttcttctccaaaactggtcttgtcaggcaaggttccatgcagagagagattaggtttggtcctataa ggaggcctaaaaaattacaggatatccccatctccttacagaggtcatttaagggggtcaagtggtggccagtggaacca caaacaggacatgtctttgtcaaggccaagaaacaggaactcatatctaacttcaaggagcaacttcaacaaatctggaa ttggttagatctatgggaagattatgagaagttgaatttactaaaggagatacttaaactggccagttctgaagtactca gtacactctatcattatatacatcaaaggttacgagatcatcgtgatataaacaggcttcctgataagttactgctgtat atattctctttactgtcacctgaccctgacatcaggtcatgctcccaggtgtgtagaagatggagatatttgtgtgccgt agacagcctgtggatgataaagtgtcatgaactagggttgatagaggggattgagaatatggagcagttggtattacagg caaacacacatcacatgggtattgactggaaactggcgtaccaggaactcaaacgtatcaccatacaaatgaaatatgag gaagaaaagaaagtgcgggcagcctttgcagaagctgagaggttgaggaagaagaaagaggcagaggaagttgaaattga cgtaaagcgtgctacacaagctgcactagaaagagaagaaagactccgaaaagagcaggcggccaaaaagaggaaggaca agttttcgatgcgagtgagacttcctccaagtaaggaggacggtcaggaggatggagatgccgtcagtacggtgtcctcg gagaatctgtcagagagggactttatatttgaggccaaggatgaggacaatgaggatgttgatgaggaagagttagtgaa gactcagcctgagatgacatggaagcacctgacccccagggaaggggataaacccaaggagctagagaggatccaaaagg agcagaaaacggacatggctaaacatgctaaggacgagagggatcggaaaatacggaaggagcaggaaaagttactggat atagagagggaaagattcaaattacataggacaaagactgatgtcagccaagtccaatcaaaagtaaaacagaaggagcc tacaaagaaaagtaaagatgagtttgcctacgatgttaggacagatctccatcaagcatcagatatcttgggtcacatga atggagtagtggctttatggtttgacaaaaagcggttgattacagctggattagacagaactgtgcggttatgggacatc aggagtggaaaaagtatacataaattttacggacataagggagggattcggtgcttgcagtttgagggtaatacactgct aacaggatcatgggatactactataattgtatgggatctgagaacatttgagaagagagccattcttacagatcacagag gatgtggtggactattttctggttcccatgactgtacagtacgggtctggtacagaatgtctttcttgccatgtaaggtc atcagaggtcatcggggcggagtaaactgtctggcttacgatgggactttcctggtatcaggatctagtgatatcaagct agaatttcaattgattgtccaataa |
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| Transcript ID | pfu_aug2.0_51.1_03517.t3 |
| Definition | - |
>pfu_aug2.0_51.1_03517.t3 atgcctgccaccatcgtgcctataaacctgactcggagctattcccttaggaatcccgatggcttacggtacggtaactt tgagggtatggtccacttacctccccttaccaggagcagcaaacccatagaacaggtcaacttctccaaattcaacaatg aacagatatatagaactatatgtgaatggtttgaatcatggagagcttggcaacaaagaacacttctctatggaattgtt gacaggtgtaataccagacagctggacatattgtcaacaacattagaacctgtcagacatcgggattatgctgctgcgta taaaatgcctgttattgaggagaaagtgatgttttctaatgccaccactctgtctccactcgcagcttttgctgatgatg tggccacgaacatcataaagaatgccattgatgaagttatagcaccactgaaaaaaaaagataagaaaacagaagaatct gataaagaagttcaaccttcaagtttacagactgaagaaaagaaaagaaatgtagcaaatgataaacctgaaacaatctc ctcaggtcaggatcatgagtctgtattttctggagcaaaaatagaaaggaaacttgtaccttctataaagcgatcaaatt ctatgccgcgtgagttaggtaacgtgaggattctgacaccgaggagtttagagacagccctaatgcagcatcaaggagga cttactcgcagcgtgtctaacatctcacagaggagtgcttcagagatgagatacagactgtttgggtcccagaccaccgt cagtacacctgacttcttctccaaaactggtcttgtcaggcaaggttccatgcagagagagattaggtttggtcctataa ggaggcctaaaaaattacaggatatccccatctccttacagaggtcatttaagggggtcaagtggtggccagtggaacca caaacaggacatgtctttgtcaaggccaagaaacaggaactcatatctaacttcaaggagcaacttcaacaaatctggaa ttggttagatctatgggaagattatgagaagttgaatttactaaaggagatacttaaactggccagttctgaagtactca gtacactctatcattatatacatcaaaggttacgagatcatcgtgatataaacaggcttcctgataagttactgctgtat atattctctttactgtcacctgaccctgacatcaggtcatgctcccaggtgtgtagaagatggagatatttgtgtgccgt agacagcctgtggatgataaagtgtcatgaactagggttgatagaggggattgagaatatggagcagttggtattacagg caaacacacatcacatgggtattgactggaaactggcgtaccaggaactcaaacgtatcaccatacaaatgaaatatgag gaagaaaagaaagtgcgggcagcctttgcagaagctgagaggttgaggaagaagaaagaggcagaggaaggagacattag ccctgactttatatcagagaaatctgttagcattgtactagacagtaatgacatcttggagcaatataaaaagctgtttc attacgatgagtatactccgcccgaatcagaagaatccactccaaggaaagtgtcaacaggtcaagttgaaattgacgta aagcgtgctacacaagctgcactagaaagagaagaaagactccgaaaagagcaggcggccaaaaagaggaaggacaagtt ttcgatgcgagtgagacttcctccaagtaaggaggacggtcaggaggatggagatgccgtcagtacggtgtcctcggaga atctgtcagagagggactttatatttgaggccaaggatgaggacaatgaggatgttgatgaggaagagttagtgaagact cagcctgagatgacatggaagcacctgacccccagggaaggggataaacccaaggagctagagaggatccaaaaggagca gaaaacggacatggctaaacatgctaaggacgagagggatcggaaaatacggaaggagcaggaaaagttactggatatag agagggaaagattcaaattacataggacaaagactgatgtcagccaagtccaatcaaaagtaaaacagaaggagcctaca aagaaaagtaaagatgagtttgcctacgatgttaggacagatctccatcaagcatcagatatcttgggtcacatgaatgg agtagtggctttatggtttgacaaaaagcggttgattacagctggattagacagaactgtgcggttatgggacatcagga gtggaaaaagtatacataaattttacggacataagggagggattcggtgcttgcagtttgagggtaatacactgctaaca ggatcatgggatactactataattgtatgggatctgagaacatttgagaagagagccattcttacagatcacagaggatg tggtggactattttctggttcccatgactgtacagtacgggtctggtacagaatgtctttcttgccatgtaaggtcatca gaggtcatcggggcggagtaaactgtctggcttacgatgggactttcctggtatcaggatctagtgatatcaagctagaa tttcaattgattgtccaataa |
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Protein
| Protein ID | pfu_aug2.0_51.1_03517.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_51.1_03517.t1 MPATIVPINLTRSYSLRNPDGLRYGNFEGMVHLPPLTRSSKPIEQVNFSKFNNEQIYRTICEWFESWRAWQQRTLLYGIV DRCNTRQLDILSTTLEPVRHRDYAAAYKMPVIEEKVMFSNATTLSPLAAFADDVATNIIKNAIDEVIAPLKKKDKKTEES DKEVQPSSLQTEEKKRNVANDKPETISSGQDHESVFSGAKIERKLVPSIKRSNSMPRELGNVRILTPRSLETALMQHQGG LTRSVSNISQRSASEMRYRLFGSQTTVSTPDFFSKTGLVRQGSMQREIRFGPIRRPKKLQDIPISLQRSFKGVKWWPVEP QTGHVFVKAKKQELISNFKEQLQQIWNWLDLWEDYEKLNLLKEILKLASSEVLSTLYHYIHQRLRDHRDINRLPDKLLLY IFSLLSPDPDIRSCSQVCRRWRYLCAVDSLWMIKCHELGLIEGIENMEQLVLQANTHHMGIDWKLAYQELKRITIQMKYE EEKKVRAAFAEAERLRKKKEAEEGDISPDFISEKSVSIVLDSNDILEQYKKLFHYDEYTPPESEESTPRKVSTGQVEIDV KRATQAALEREERLRKEQAAKKRKDKFSMRVRLPPSKEDGQEDGDAVSTVSSENLSERDFIFEAKDEDNEDVDEEELVKT QPEMTWKHLTPREGDKPKELERIQKEQKTDMAKHAKDERDRKIRKEQEKLLDIERERFKLHRTKTDVRGIRKEKEEENFK RRSFFYKGILESRYFTKSNQK |
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| Protein ID | pfu_aug2.0_51.1_03517.t2 |
| Definition | - |
>pfu_aug2.0_51.1_03517.t2 MPATIVPINLTRSYSLRNPDGLRYGNFEGMVHLPPLTRSSKPIEQVNFSKFNNEQIYRTICEWFESWRAWQQRTLLYGIV DRCNTRQLDILSTTLEPVRHRDYAAAYKMPVIEEKVMFSNATTLSPLAAFADDVATNIIKNAIDEVIAPLKKKDKKTEES DKEVQPSSLQTEEKKRNVANDKPETISSGQDHESVFSGAKIERKLVPSIKRSNSMPRELGNVRILTPRSLETALMQHQGG LTRSVSNISQRSASEMRYRLFGSQTTVSTPDFFSKTGLVRQGSMQREIRFGPIRRPKKLQDIPISLQRSFKGVKWWPVEP QTGHVFVKAKKQELISNFKEQLQQIWNWLDLWEDYEKLNLLKEILKLASSEVLSTLYHYIHQRLRDHRDINRLPDKLLLY IFSLLSPDPDIRSCSQVCRRWRYLCAVDSLWMIKCHELGLIEGIENMEQLVLQANTHHMGIDWKLAYQELKRITIQMKYE EEKKVRAAFAEAERLRKKKEAEEVEIDVKRATQAALEREERLRKEQAAKKRKDKFSMRVRLPPSKEDGQEDGDAVSTVSS ENLSERDFIFEAKDEDNEDVDEEELVKTQPEMTWKHLTPREGDKPKELERIQKEQKTDMAKHAKDERDRKIRKEQEKLLD IERERFKLHRTKTDVSQVQSKVKQKEPTKKSKDEFAYDVRTDLHQASDILGHMNGVVALWFDKKRLITAGLDRTVRLWDI RSGKSIHKFYGHKGGIRCLQFEGNTLLTGSWDTTIIVWDLRTFEKRAILTDHRGCGGLFSGSHDCTVRVWYRMSFLPCKV IRGHRGGVNCLAYDGTFLVSGSSDIKLEFQLIVQ |
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| Protein ID | pfu_aug2.0_51.1_03517.t3 |
| Definition | - |
>pfu_aug2.0_51.1_03517.t3 MPATIVPINLTRSYSLRNPDGLRYGNFEGMVHLPPLTRSSKPIEQVNFSKFNNEQIYRTICEWFESWRAWQQRTLLYGIV DRCNTRQLDILSTTLEPVRHRDYAAAYKMPVIEEKVMFSNATTLSPLAAFADDVATNIIKNAIDEVIAPLKKKDKKTEES DKEVQPSSLQTEEKKRNVANDKPETISSGQDHESVFSGAKIERKLVPSIKRSNSMPRELGNVRILTPRSLETALMQHQGG LTRSVSNISQRSASEMRYRLFGSQTTVSTPDFFSKTGLVRQGSMQREIRFGPIRRPKKLQDIPISLQRSFKGVKWWPVEP QTGHVFVKAKKQELISNFKEQLQQIWNWLDLWEDYEKLNLLKEILKLASSEVLSTLYHYIHQRLRDHRDINRLPDKLLLY IFSLLSPDPDIRSCSQVCRRWRYLCAVDSLWMIKCHELGLIEGIENMEQLVLQANTHHMGIDWKLAYQELKRITIQMKYE EEKKVRAAFAEAERLRKKKEAEEGDISPDFISEKSVSIVLDSNDILEQYKKLFHYDEYTPPESEESTPRKVSTGQVEIDV KRATQAALEREERLRKEQAAKKRKDKFSMRVRLPPSKEDGQEDGDAVSTVSSENLSERDFIFEAKDEDNEDVDEEELVKT QPEMTWKHLTPREGDKPKELERIQKEQKTDMAKHAKDERDRKIRKEQEKLLDIERERFKLHRTKTDVSQVQSKVKQKEPT KKSKDEFAYDVRTDLHQASDILGHMNGVVALWFDKKRLITAGLDRTVRLWDIRSGKSIHKFYGHKGGIRCLQFEGNTLLT GSWDTTIIVWDLRTFEKRAILTDHRGCGGLFSGSHDCTVRVWYRMSFLPCKVIRGHRGGVNCLAYDGTFLVSGSSDIKLE FQLIVQ |
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