Gene
| Gene Model ID | pfu_aug2.0_51.1_03518 |
|---|---|
| Locus | scaffold51.1 : 421213 ... 437272 : + |
| To GenomeBrowser | scaffold51.1:421213..437272 |
| Genes list of scaffold | scaffold51.1 |
| Synonym | NA |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| cyclin-dependent kinase inhibitor 3 | GO:0004721 GO:0006796 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_51.1_03518.t1 | 1 | 1 | CDKN3 | 2 | 144 | 2.1e-36 | 124.8 | 1.9e-38 | 9.3e-35 | 119.5 |
| pfu_aug2.0_51.1_03518.t1 | 1 | 1 | Y_phosphatase | 78 | 166 | 9.7e-09 | 34.8 | 3.2e-12 | 1.6e-08 | 34.2 |
| pfu_aug2.0_51.1_03518.t1 | 1 | 1 | DSPc | 87 | 168 | 3.7e-06 | 26.5 | 9.3e-10 | 4.6e-06 | 26.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_51.1_03518.t1 | gi|676453202|ref|XP_009053279.1| | hypothetical protein LOTGIDRAFT_188309 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_51.1_03518.t1 | gi|260803976|ref|XP_002596865.1| | hypothetical protein BRAFLDRAFT_99767 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_51.1_03518.t1 | gi|545507392|ref|XP_005623468.1| | PREDICTED: cyclin-dependent kinase inhibitor 3 isoform X4 [Canis lupus familiaris] | 0.0 |
| pfu_aug2.0_51.1_03518.t1 | gi|638252569|ref|NP_001279316.1| | cyclin-dependent kinase inhibitor 3 [Callorhinchus milii] | 0.0 |
| pfu_aug2.0_51.1_03518.t1 | gi|356461034|ref|NP_001239091.1| | cyclin-dependent kinase inhibitor 3 [Gallus gallus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_51.1_03518.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_51.1_03518.t1 atgtcatcgtttgattcgtcggacgaggatgacaaacaagaagaagatcgatctccattgaaaattgcttggtttgacca gtccgatgcagatgaagtttttgggatatgtgcccttccagaatgtttacaaacagaagaggtcaaggacattttctgcc tgtgtagtaaaggtgaactgaacaagtaccgtgtccctgaccttttgacctctctggcagaggctgatattacagtacac cattaccacttccctgatggagagacccctcccacccagctgttgatctccatgttagatgagctcaaagtggccatgaa aaacaaacggaaacctgttgttcactgttatggaggattagggagatcatgtctcgtggcttcatgtctcttaatgatat tagacacagacttcactcctgaggaggccatatctaaaatgaaggagatgagaggaccaagagcagtacagtctgtcagg caatataactacataaacgacttccgtaaaactttgtcagactactacaaggacgacgaggaagcccaaaggtctctgtc tagataa |
|
Protein
| Protein ID | pfu_aug2.0_51.1_03518.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_51.1_03518.t1 MSSFDSSDEDDKQEEDRSPLKIAWFDQSDADEVFGICALPECLQTEEVKDIFCLCSKGELNKYRVPDLLTSLAEADITVH HYHFPDGETPPTQLLISMLDELKVAMKNKRKPVVHCYGGLGRSCLVASCLLMILDTDFTPEEAISKMKEMRGPRAVQSVR QYNYINDFRKTLSDYYKDDEEAQRSLSR |
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