Gene
| Gene Model ID | pfu_aug2.0_51.1_03520 |
|---|---|
| Locus | scaffold51.1 : 483723 ... 487318 : + |
| To GenomeBrowser | scaffold51.1:483723..487318 |
| Genes list of scaffold | scaffold51.1 |
| Synonym | pfu_aug1.0_58928.1_05653 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| alpha- sarcomeric-like | GO:0001725 GO:0001882 GO:0005509 GO:0005615 GO:0005634 GO:0005911 GO:0005925 GO:0015031 GO:0030018 GO:0030374 GO:0030529 GO:0030863 GO:0031143 GO:0035357 GO:0042803 GO:0042974 GO:0042981 GO:0043005 GO:0043234 GO:0044822 GO:0047485 GO:0048384 GO:0048471 GO:0048549 GO:0051015 GO:0051017 GO:0051271 GO:0051272 GO:0051764 GO:0070062 GO:0070830 GO:1902396 GO:1903506 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_51.1_03520.t1 | 1 | 1 | EFhand_Ca_insen | 27 | 93 | 6.4e-28 | 96.5 | 3.4e-31 | 1.0e-27 | 95.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_51.1_03520.t1 | gi|676460768|ref|XP_009055729.1| | hypothetical protein LOTGIDRAFT_189716 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_51.1_03520.t1 | gi|156341019|ref|XP_001620628.1| | hypothetical protein NEMVEDRAFT_v1g147531 [Nematostella vectensis] | 0.0 |
| pfu_aug2.0_51.1_03520.t1 | gi|704267897|ref|XP_010153124.1| | PREDICTED: alpha-actinin-1-like [Eurypyga helias] | 0.0 |
| pfu_aug2.0_51.1_03520.t1 | gi|736246163|ref|XP_010786547.1| | PREDICTED: alpha-actinin-4-like [Notothenia coriiceps] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_51.1_03520.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_51.1_03520.t1 atgtctattgttgatcccaataactccggctacgtaacatttgaagcgttccttgacttcatgacaagagagacagctga tacagacacggcagaacaagtcatgcagtcattcaaaatcctggctggtgataagccttacattactgcccaaatcctac gccaagagttgccccctgatcaggcagaatattgtatccagcgtatggcaccgtattctggacgtgacgctgccccagga gccctcgattacatgtctttctccactgcgctgtatggtgaaagtgacctttga |
|
Protein
| Protein ID | pfu_aug2.0_51.1_03520.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_51.1_03520.t1 MSIVDPNNSGYVTFEAFLDFMTRETADTDTAEQVMQSFKILAGDKPYITAQILRQELPPDQAEYCIQRMAPYSGRDAAPG ALDYMSFSTALYGESDL |
|