Gene
| Gene Model ID | pfu_aug2.0_51.1_03524 |
|---|---|
| Locus | scaffold51.1 : 556487 ... 564902 : + |
| To GenomeBrowser | scaffold51.1:556487..564902 |
| Genes list of scaffold | scaffold51.1 |
| Synonym | pfu_aug1.0_674.1_07625 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| ribosyldihydronicotinamide dehydrogenase | GO:0005634 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_51.1_03524.t1 | 1 | 1 | Flavodoxin_2 | 14 | 223 | 0.0 | 174.7 | 0.0 | 0.0 | 174.4 |
| pfu_aug2.0_51.1_03524.t1 | 1 | 1 | FMN_red | 17 | 163 | 1.7e-09 | 37.3 | 6.4e-13 | 3.2e-09 | 36.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_51.1_03524.t1 | gi|557016610|ref|XP_006008734.1| | PREDICTED: NAD(P)H dehydrogenase [quinone] 1-like isoform X1 [Latimeria chalumnae] | 0.0 |
| pfu_aug2.0_51.1_03524.t1 | gi|512881724|ref|XP_004895292.1| | 0.0 | |
| pfu_aug2.0_51.1_03524.t1 | gi|291409431|ref|XP_002721012.1| | PREDICTED: ribosyldihydronicotinamide dehydrogenase [quinone] [Oryctolagus cuniculus] | 0.0 |
| pfu_aug2.0_51.1_03524.t1 | gi|533170920|ref|XP_005398962.1| | PREDICTED: ribosyldihydronicotinamide dehydrogenase [quinone] isoform X1 [Chinchilla lanigera] | 0.0 |
| pfu_aug2.0_51.1_03524.t1 | gi|488596537|ref|XP_004483446.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_51.1_03524.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_51.1_03524.t1 atgcctgataaatcaacgcatatcgtccagatggcggccaagaatgtattgatcgtgttcgcccatcaggatccatacaa atcatttaatggcgctctcaaagacgaagcagtgaaaattctacaagagggaggacataaagtagaggtttctgacctat atgaccagaaatgggatcccagagccacaaaaaacgacttcacagggtctccccaaaacgaggaatccttcagttatgtt gtagaacaggcacatgctgtcgcacaaggtaaactgacagaggacattgtgtccgagcaagagaagttaaagacagctga tctggttattttccagttccctatgtattggttttccgttccagctatacttaaaggatggtttgacaaggtttttgcag gaggtgtaacacatgcatatccagccaacgtgtatgaaaacggatttatgaagggaaagaaagcgttgttgtcatttact acgggaggacctcagtccatgtacacatcagaaggttatcatggagatattaatatgatactatatccaattcattgggg tacccttaagtttgttgggttcgacgtactaaaacccaatatagccttctgtcctagcttcagcagcgagaaagatcgaa agacaatgattgaagattggaaatcaagattacaaacaatatttaatgaggaatcgattcaggtgaaaggaaaattatag |
|
Protein
| Protein ID | pfu_aug2.0_51.1_03524.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_51.1_03524.t1 MPDKSTHIVQMAAKNVLIVFAHQDPYKSFNGALKDEAVKILQEGGHKVEVSDLYDQKWDPRATKNDFTGSPQNEESFSYV VEQAHAVAQGKLTEDIVSEQEKLKTADLVIFQFPMYWFSVPAILKGWFDKVFAGGVTHAYPANVYENGFMKGKKALLSFT TGGPQSMYTSEGYHGDINMILYPIHWGTLKFVGFDVLKPNIAFCPSFSSEKDRKTMIEDWKSRLQTIFNEESIQVKGKL |
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