Gene
| Gene Model ID | pfu_aug2.0_510.1_00825 |
|---|---|
| Locus | scaffold510.1 : 16 ... 3461 : + |
| To GenomeBrowser | scaffold510.1:16..3461 |
| Genes list of scaffold | scaffold510.1 |
| Synonym | pfu_aug1.0_16420.1_18337 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_510.1_00825.t1 | 1 | 1 | C1q | 78 | 123 | 2.6e-10 | 40.3 | 2.4e-14 | 3.6e-10 | 39.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_510.1_00825.t1 | gi|585644286|ref|XP_006813839.1| | PREDICTED: uncharacterized protein LOC100372062 [Saccoglossus kowalevskii] | 6.0e-22 |
| pfu_aug2.0_510.1_00825.t1 | gi|585644282|ref|XP_006813838.1| | PREDICTED: uncharacterized protein LOC100371911 [Saccoglossus kowalevskii] | 2.0e-21 |
| pfu_aug2.0_510.1_00825.t1 | gi|410931562|ref|XP_003979164.1| | 1.0e-19 | |
| pfu_aug2.0_510.1_00825.t1 | gi|597806532|ref|XP_007243149.1| | PREDICTED: uncharacterized protein LOC103032009, partial [Astyanax mexicanus] | 2.0e-18 |
Transcript
| Transcript ID | pfu_aug2.0_510.1_00825.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_510.1_00825.t1 atgcgaaaatggagaccacccgatgcaccccctaatgacgtgtggcgcgtcgttcagcagatagtggttccagtagcata tcgcggggacatcacgagtttagctcacgacacacccatgacaggtcatttaggtgtcagtaagacttataataggattt taagtcacttttactggcctaagttgagaaaagatgtgtctgagttttgatctacatacagacattctatagctttccat gctgggctaagtaaaactgtacagaacctacctcacaactataagctggtatttgataagatataccttaaccagggtgg cgcttacgatccacacactggcgtatttacctgccacattgagggaatataa |
|
Protein
| Protein ID | pfu_aug2.0_510.1_00825.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_510.1_00825.t1 MRKWRPPDAPPNDVWRVVQQIVVPVAYRGDITSLAHDTPMTGHLGVSKTYNRILSHFYWPKLRKDVSEFXSTYRHSIAFH AGLSKTVQNLPHNYKLVFDKIYLNQGGAYDPHTGVFTCHIEGI |
|