Gene
| Gene Model ID | pfu_aug2.0_510.1_00826 |
|---|---|
| Locus | scaffold510.1 : 8046 ... 13341 : + |
| To GenomeBrowser | scaffold510.1:8046..13341 |
| Genes list of scaffold | scaffold510.1 |
| Synonym | pfu_aug1.0_5165.1_45125 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_510.1_00826.t1 | 2 | 1 | C1q | 7 | 48 | 3.7e-20 | 72.2 | 0.031 | 460.0 | 0.8 |
| pfu_aug2.0_510.1_00826.t1 | 2 | 2 | C1q | 70 | 192 | 3.7e-20 | 72.2 | 1.6e-23 | 2.4e-19 | 69.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_510.1_00826.t1 | gi|676432873|ref|XP_009046716.1| | hypothetical protein LOTGIDRAFT_58867, partial [Lottia gigantea] | 2.0e-10 |
| pfu_aug2.0_510.1_00826.t1 | gi|675862014|ref|XP_009016567.1| | hypothetical protein HELRODRAFT_77797 [Helobdella robusta] | 3.0e-09 |
| pfu_aug2.0_510.1_00826.t1 | gi|410919475|ref|XP_003973210.1| | PREDICTED: complement C1q-like protein 4 [Takifugu rubripes] | 3.0e-09 |
| pfu_aug2.0_510.1_00826.t1 | gi|602638925|ref|XP_007426285.1| | PREDICTED: complement C1q-like protein 4 [Python bivittatus] | 4.0e-09 |
| pfu_aug2.0_510.1_00826.t1 | gi|432857147|ref|XP_004068552.1| | PREDICTED: complement C1q-like protein 4 [Oryzias latipes] | 5.0e-09 |
Transcript
| Transcript ID | pfu_aug2.0_510.1_00826.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_510.1_00826.t1 atgagtcgatgtctgctgtttttgtgctacatcgccactatttatggaattacctgtaataattctgaaaaggatctgag cgttgtcctggttcaagccttacaaggtcaactacaaacatgtatggatcagaacgctgagttaataagacgtacatgta cctctacgaatgactctacatatgaatcctctgaggctgacaaaatcgcgttccacactggtcttagtaaggatattaca gaccttccaaatggtcagatattgatatttgacacagtgtacctgaacgaaggaaattcatacaacccaaagacgggtgt attcacctgcatcagggacgggatctatgtgtttcactggacaatactcaccaaaatggggaagtatttctacactgatt tcatggttaatgggaaacttgctggacggtcccatcccaatggagcgactgttaatagggctgcgagcagtacagttgta aagaaaatggctgtaggtgaccgagcgtggattcaaccacactcgaactttgtcggtcaatatgcatttgggggatggag tttcttctcaggttataagctgtaa |
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Protein
| Protein ID | pfu_aug2.0_510.1_00826.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_510.1_00826.t1 MSRCLLFLCYIATIYGITCNNSEKDLSVVLVQALQGQLQTCMDQNAELIRRTCTSTNDSTYESSEADKIAFHTGLSKDIT DLPNGQILIFDTVYLNEGNSYNPKTGVFTCIRDGIYVFHWTILTKMGKYFYTDFMVNGKLAGRSHPNGATVNRAASSTVV KKMAVGDRAWIQPHSNFVGQYAFGGWSFFSGYKL |
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