Gene
| Gene Model ID | pfu_aug2.0_510.1_00829 |
|---|---|
| Locus | scaffold510.1 : 86004 ... 92315 : - |
| To GenomeBrowser | scaffold510.1:86004..92315 |
| Genes list of scaffold | scaffold510.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_510.1_00829.t1 | 3 | 1 | C1q | 21 | 48 | 8.3e-26 | 90.4 | 0.09 | 1300.0 | -0.7 |
| pfu_aug2.0_510.1_00829.t1 | 3 | 2 | C1q | 69 | 105 | 8.3e-26 | 90.4 | 4.3e-07 | 0.0064 | 16.4 |
| pfu_aug2.0_510.1_00829.t1 | 3 | 3 | C1q | 113 | 237 | 8.3e-26 | 90.4 | 1.1e-25 | 1.7e-21 | 76.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_510.1_00829.t1 | gi|260801193|ref|XP_002595480.1| | hypothetical protein BRAFLDRAFT_69134 [Branchiostoma floridae] | 4.0e-10 |
| pfu_aug2.0_510.1_00829.t1 | gi|696998566|ref|XP_009565595.1| | PREDICTED: C1q-related factor [Cuculus canorus] | 9.0e-10 |
| pfu_aug2.0_510.1_00829.t1 | gi|734617601|ref|XP_010736504.1| | PREDICTED: otolin-1, partial [Larimichthys crocea] | 4.0e-09 |
| pfu_aug2.0_510.1_00829.t1 | gi|432892159|ref|XP_004075682.1| | PREDICTED: otolin-1 [Oryzias latipes] | 6.0e-09 |
Transcript
| Transcript ID | pfu_aug2.0_510.1_00829.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_510.1_00829.t1 atgcggtctatactttggctgagtacggtgttaatcattgctggagtcagcatccttagtgcagcagatcaggatatcag tctaatgttggtacagactgtacagaaacagctacaaacctgcatggaccagaatgctgagctcgttaaaagaagttgta acgacggattcaattacattggatcatccaacacttctaagatagcattttacaccgggctgaactccagtttacagaat ctcccatacaactacaagcttgtgtttgacaaagtatatctaaacgagggcaaggcttatgactttcacactgggtcatc caacacttctaagatagcattttacaccgggctgaactccagtgtacagaatctcccatacaactacaagcttgtgtttg acaaagtatacctaaacgagggcaaagcttatgactttcatactggtattttcacctgccctacagacggtatctatgtc ttccactggaccatcactacaaaggctggacagtacttctacactgatttcatagtcaatggaaacgttgtaggacgatc tcggcctcatgccgcttatgtgaatcgtgcggccagcagcacagtggtacagagattggtgaaaggtgacaaggtgtgga tagaaccgtctggtaactacactggtcaatatgcctatgaaggatggagcttttactcaggatacatgatctaa |
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Protein
| Protein ID | pfu_aug2.0_510.1_00829.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_510.1_00829.t1 MRSILWLSTVLIIAGVSILSAADQDISLMLVQTVQKQLQTCMDQNAELVKRSCNDGFNYIGSSNTSKIAFYTGLNSSLQN LPYNYKLVFDKVYLNEGKAYDFHTGSSNTSKIAFYTGLNSSVQNLPYNYKLVFDKVYLNEGKAYDFHTGIFTCPTDGIYV FHWTITTKAGQYFYTDFIVNGNVVGRSRPHAAYVNRAASSTVVQRLVKGDKVWIEPSGNYTGQYAYEGWSFYSGYMI |
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