Gene
| Gene Model ID | pfu_aug2.0_510.1_00830 |
|---|---|
| Locus | scaffold510.1 : 100053 ... 103248 : + |
| To GenomeBrowser | scaffold510.1:100053..103248 |
| Genes list of scaffold | scaffold510.1 |
| Synonym | pfu_aug1.0_99596.1_56925 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_510.1_00830.t1 | 2 | 1 | C1q | 19 | 47 | 2.5e-08 | 33.9 | 0.014 | 200.0 | 1.9 |
| pfu_aug2.0_510.1_00830.t1 | 2 | 2 | C1q | 69 | 117 | 2.5e-08 | 33.9 | 4.0e-12 | 6.0e-08 | 32.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_510.1_00830.t1 | gi|573874985|ref|XP_006625837.1| | PREDICTED: EMILIN-1-like [Lepisosteus oculatus] | 5.0e-07 |
Transcript
| Transcript ID | pfu_aug2.0_510.1_00830.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_510.1_00830.t1 atgtggaatcttctacactttgctgtggctctcatggtcggtatcaattttgctacgactgctgaacaagacgtgagtct aatgttagtacagactgtacaggctcagctacagacatgtatggaacagaatgctgatctggtcaaaagaagctgtagta atagaaatagtagttcatttgggcttccaatttctccaaaagttgccttccatgctggacttaacaaagatgtggtgaac cttccgtacaactccaagctggcgtttgacaaagtttatctgaaccaaggattagcctatgatccgaccactggtgtctt cacgtattcctacagtggtcaatatgcatatgcaggatggagcttttactctggttatatgctctag |
|
Protein
| Protein ID | pfu_aug2.0_510.1_00830.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_510.1_00830.t1 MWNLLHFAVALMVGINFATTAEQDVSLMLVQTVQAQLQTCMEQNADLVKRSCSNRNSSSFGLPISPKVAFHAGLNKDVVN LPYNSKLAFDKVYLNQGLAYDPTTGVFTYSYSGQYAYAGWSFYSGYML |
|