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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_510.1_00834
Locus scaffold510.1 : 212139 ... 242552 : -
To GenomeBrowser scaffold510.1:212139..242552
Genes list of scaffold scaffold510.1
Synonym pfu_aug1.0_22212.1_62133

Manual annotation
Annotation by Blast2GO
Annotation GO
eukaryotic translation initiation factor 5a-2 GO:0003743 GO:0003746 GO:0006413 GO:0006452 GO:0043022 GO:0045901 GO:0045905

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_510.1_00834.t1 gi|118779554|ref|XP_564212.2| AGAP011284-PA [Anopheles gambiae str. PEST] 3.0e-14
pfu_aug2.0_510.1_00834.t1 gi|317575588|ref|NP_001187938.1| eukaryotic translation initiation factor 5a-1 [Ictalurus punctatus] 5.0e-14
pfu_aug2.0_510.1_00834.t1 gi|620953914|ref|XP_001518802.2| PREDICTED: eukaryotic translation initiation factor 5A-2-like isoform X2 [Ornithorhynchus anatinus] 8.0e-14
pfu_aug2.0_510.1_00834.t1 gi|677967192|ref|XP_009069650.1| PREDICTED: eukaryotic translation initiation factor 5A-2, partial [Acanthisitta chloris] 1.0e-13
pfu_aug2.0_510.1_00834.t1 gi|542152183|ref|XP_005484990.1| PREDICTED: eukaryotic translation initiation factor 5A-2 [Zonotrichia albicollis] 1.0e-13

Transcript
Transcript IDpfu_aug2.0_510.1_00834.t1
Definition-
>pfu_aug2.0_510.1_00834.t1
atggtcggaatagatatctttacaggcaagaaatacgaagacatctgtccctccactcataatatggaagttccaaatgt
ttcacgtaaagaatatcagttacgacaaaaggaggtcaattctcagaaacaacaatttatggcaaagttcttcagacgac
agaataaatcgccaaaacagggtgctctgaatttagtgaacaggacagtagatttgcacttaggagagaatctggatcat
tctgatcaagtttga

Protein
Protein IDpfu_aug2.0_510.1_00834.t1
Definition-
>pfu_aug2.0_510.1_00834.t1
MVGIDIFTGKKYEDICPSTHNMEVPNVSRKEYQLRQKEVNSQKQQFMAKFFRRQNKSPKQGALNLVNRTVDLHLGENLDH
SDQV

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