Gene
| Gene Model ID | pfu_aug2.0_511.1_04268 |
|---|---|
| Locus | scaffold511.1 : 116026 ... 131201 : + |
| To GenomeBrowser | scaffold511.1:116026..131201 |
| Genes list of scaffold | scaffold511.1 |
| Synonym | pfu_aug1.0_7323.1_52935 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_511.1_04268.t1 | 2 | 1 | zf-primase | 181 | 196 | 1.2e-14 | 53.5 | 0.48 | 3600.0 | -2.4 |
| pfu_aug2.0_511.1_04268.t1 | 2 | 2 | zf-primase | 536 | 581 | 1.2e-14 | 53.5 | 1.7e-18 | 1.2e-14 | 53.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_511.1_04268.t1 | gi|524907487|ref|XP_005108860.1| | PREDICTED: protein MCM10 homolog isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_511.1_04268.t1 | gi|676437447|ref|XP_009048207.1| | hypothetical protein LOTGIDRAFT_238353 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_511.1_04268.t1 | gi|260814063|ref|XP_002601735.1| | hypothetical protein BRAFLDRAFT_76045 [Branchiostoma floridae] | 9.80909e-45 |
| pfu_aug2.0_511.1_04268.t1 | gi|548427306|ref|XP_005743408.1| | PREDICTED: protein MCM10 homolog isoform X1 [Pundamilia nyererei] | 4.00001e-41 |
| pfu_aug2.0_511.1_04268.t1 | gi|548427312|ref|XP_005743409.1| | PREDICTED: protein MCM10 homolog isoform X2 [Pundamilia nyererei] | 4.99997e-41 |
Transcript
| Transcript ID | pfu_aug2.0_511.1_04268.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_511.1_04268.t1 atgtggtgcctttgggacgatacaagtgggattgaattagatgtcttggtccttccagtgaaggttcagcctgcttttaa agtattgtttacattaggggaatccaccacatggatcgggagactattccatacattcactactcttgttagagaaaaga acatggcagatagtaaggtgccagcagagataacagaaaacaatgagacagaaagcaatgtgccctcagagataacggaa aacaatgagacagaaagcaatgtgccctcagagatcagtgaaatagaagctcggatgttgaaaatgcaagaggagatgat ggccttgcaagcagaattattaaaacagaggaaattgaattctgaactttcgaacacaaaggagatttcacattctacaa ctaaagatgacgatgctttaaaacaattaaaacagttgccaaaacatggtgttggtgttttgaaagagaaaagactgtct cctaaaaatgattccgtgaaacattttaaacagtcccctaaagaggatgccctgaaacataaaaaccataaaaatgacca ggagtgtgatattataaataagaaaaagaaagttatttcaaagagagaagatccatccctttcttcagttgctttatcat caactgaagaggagaatccattctttggcaaggatgtcggaaaagctgaacctacaaagaaacacaacaatgtagataaa aataccaaacaaaaaagccacgggagtcaagagaaaatgtcagaggacgtcacagctcagagtttgtttggggacagtga tagtgattgggatgagttagatggagataagccatggacactgtcagatacaggccaagagatcaggcagataatgaaga agggagacaaagagagagtgtctcatgctaataaatctgatgtacaggctctcagggataaagctgtcaaaccaaactct tggaaggatcgcccctttcttggacagaagcagatagatccatccccaaaacattcgtgcaaagaaaatgacatgccctc gattacagatcctttctctaacataagaattgtaaatcccaaagtgtcgtccttggatatgaagatgaagatgcaggatc gtaagctattcaaattgtccactctaaatactaggccatcagctgacctacaaggaaactgggtcactattggagtggtc atttataagtcagaacctcgcacatcagcatctggtaagaattactgcctttggaagttaagtgatttgcagaactgtga tcaagtgataaccttcttcttgtttggagaagtgtacaaacagcactggaagaatgaagtcagcactgtggtaggattac ttaaccccaacccaatggataaggctgaaaagggtaagaattactgcctttggaagttaagtgatttgcagaactgtgat caagtgataaccttcttcttgtttggagaggtgttcaaacagcactggaagaatgaagtcagcactgtggtaggattact taacccaaaccccatggataaggctgaaaaggccagtaaagatgtagctttcacagtaaatcacccacatcagattctgg tgatgggacactcaaaagacctgggcaagtgtgctggcacaaacagggcaggaaacgcctgtaccaacattattaacaag cagcatggggaattttgtacctaccatgtacaagctgcttataaaaggtccagttctaaacgtacagaattacaaggagg gtaa |
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Protein
| Protein ID | pfu_aug2.0_511.1_04268.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_511.1_04268.t1 MWCLWDDTSGIELDVLVLPVKVQPAFKVLFTLGESTTWIGRLFHTFTTLVREKNMADSKVPAEITENNETESNVPSEITE NNETESNVPSEISEIEARMLKMQEEMMALQAELLKQRKLNSELSNTKEISHSTTKDDDALKQLKQLPKHGVGVLKEKRLS PKNDSVKHFKQSPKEDALKHKNHKNDQECDIINKKKKVISKREDPSLSSVALSSTEEENPFFGKDVGKAEPTKKHNNVDK NTKQKSHGSQEKMSEDVTAQSLFGDSDSDWDELDGDKPWTLSDTGQEIRQIMKKGDKERVSHANKSDVQALRDKAVKPNS WKDRPFLGQKQIDPSPKHSCKENDMPSITDPFSNIRIVNPKVSSLDMKMKMQDRKLFKLSTLNTRPSADLQGNWVTIGVV IYKSEPRTSASGKNYCLWKLSDLQNCDQVITFFLFGEVYKQHWKNEVSTVVGLLNPNPMDKAEKGKNYCLWKLSDLQNCD QVITFFLFGEVFKQHWKNEVSTVVGLLNPNPMDKAEKASKDVAFTVNHPHQILVMGHSKDLGKCAGTNRAGNACTNIINK QHGEFCTYHVQAAYKRSSSKRTELQGG |
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