Gene
| Gene Model ID | pfu_aug2.0_511.1_04269 |
|---|---|
| Locus | scaffold511.1 : 134207 ... 137795 : - |
| To GenomeBrowser | scaffold511.1:134207..137795 |
| Genes list of scaffold | scaffold511.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_511.1_04269.t1 | 4 | 1 | zf-B_box | 11 | 51 | 2.1e-07 | 30.7 | 2.2e-06 | 0.0054 | 16.6 |
| pfu_aug2.0_511.1_04269.t1 | 4 | 2 | zf-B_box | 69 | 105 | 2.1e-07 | 30.7 | 4.2e-10 | 1.0e-06 | 28.4 |
| pfu_aug2.0_511.1_04269.t1 | 4 | 3 | zf-B_box | 467 | 479 | 2.1e-07 | 30.7 | 2.8 | 7000.0 | -3.0 |
| pfu_aug2.0_511.1_04269.t1 | 4 | 4 | zf-B_box | 532 | 540 | 2.1e-07 | 30.7 | 6.0 | 15000.0 | -4.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_511.1_04269.t1 | gi|260834556|ref|XP_002612276.1| | hypothetical protein BRAFLDRAFT_104889 [Branchiostoma floridae] | 2.0e-08 |
| pfu_aug2.0_511.1_04269.t1 | gi|617462784|ref|XP_007572597.1| | PREDICTED: tripartite motif-containing protein 45-like [Poecilia formosa] | 9.0e-07 |
Transcript
| Transcript ID | pfu_aug2.0_511.1_04269.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_511.1_04269.t1 atggctacaccaaacggtatagtagatgaccaaggtcagtgcaggttctgttccgacgaggctaagtactactgcagaac atgtaaagataatctctgtttaaagtgccacgaggtccacagaaagagcaccaaggccaatacaaaccaccatcacctgg tgctgtatcaccaacgcaaagagtcacttagatcagcagcacctgacgcatgcgcagtacatccaggatccaagtacgag tttggttgtatgaactgcaacgtggcaatatgtaagaagtgtacatccacccttcacagcggacacaagaagtgtgacat gacgacattcctggacaacgttgttcccttcttgagagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnatgagtttaattacattcaaaatgtaattcccagatacggcgagtacttatcgcggctcgacga gacaccgccagcctacacattggcgattactgagatgaaacaaagaatcacacaggagaccaatcaagtgttcgattatc taaattacctggtgtatgagcgccaccaagctgtcgatgatgtggtaactttggaccaggagatagtacggatggagaag gagcggaaccaaacacagcacatgcgtctggtacaactagagcagagatacagggagttctttgcttccattgataaaaa cgtcaccattgacttcttgaacgatcgacaagactttaaagatcttataagagagcccgggaataatcatatcctgccgc ctttatatcaacctagtaacttcaactcggatattttgcgcgccaacatgccatatgtcatgtccaccaatcagagcgcg ctagtagaaacgagacttcgtcactttgataagatgctcatggcagaaccactacgtgtagcgtcattcattgtgggtaa gagcagccttctctaccagatcaaatgtctgggcagggacggggcgtggatactgacaggagaatccactctgtcacggt acaacagactaggcaagaagctggagtttgtggaaacttctgatggccagaacggtaaccctgcaggcatagcagtgaca gacaagtctatttactacacaagaacatctcctaactgtgtctgtgtgatatcacagggcaaaaagcccgaatctgttat atctacagaggactgggtacctaacggtttgtgtgtcacggctacttgggaccttgttgtagctttacagaatggtgtcc gcgggaaggtcgtcaagtattaccgtgaggtctacttggagtgtttaaccatacagaatgatcatacaggacatgctata ttcgcccagccgtggtacgtagccgagaatagagtgaacggggacttatgtgtctctgatacccaagaaaacctcctcat tgtcgttaacaaacaaggcaaactcagatttcgcttcgatgcgccgtatcgctatttccaaccaagagacatttgtacaa atgctcatggtcatattatagtggcggatccttacaacaataatattaacatcatcaacatggacggcgcgttcatcatg aacattaacacgcgacctcttgacctgtatgtacccgtggccgttagcactgatgcagaacaaaatctgtggatcggagc acgcgatacccgacgtgttgttgtcattagatacatccatgactcatag |
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Protein
| Protein ID | pfu_aug2.0_511.1_04269.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_511.1_04269.t1 MATPNGIVDDQGQCRFCSDEAKYYCRTCKDNLCLKCHEVHRKSTKANTNHHHLVLYHQRKESLRSAAPDACAVHPGSKYE FGCMNCNVAICKKCTSTLHSGHKKCDMTTFLDNVVPFLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXEFNYIQNVIPRYGEYLSRLDETPPAYTLAITEMKQRITQETNQVFDYLNYLVYERHQAVDDVVTLDQEIVRMEK ERNQTQHMRLVQLEQRYREFFASIDKNVTIDFLNDRQDFKDLIREPGNNHILPPLYQPSNFNSDILRANMPYVMSTNQSA LVETRLRHFDKMLMAEPLRVASFIVGKSSLLYQIKCLGRDGAWILTGESTLSRYNRLGKKLEFVETSDGQNGNPAGIAVT DKSIYYTRTSPNCVCVISQGKKPESVISTEDWVPNGLCVTATWDLVVALQNGVRGKVVKYYREVYLECLTIQNDHTGHAI FAQPWYVAENRVNGDLCVSDTQENLLIVVNKQGKLRFRFDAPYRYFQPRDICTNAHGHIIVADPYNNNINIINMDGAFIM NINTRPLDLYVPVAVSTDAEQNLWIGARDTRRVVVIRYIHDS |
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