Gene
| Gene Model ID | pfu_aug2.0_511.1_04270 |
|---|---|
| Locus | scaffold511.1 : 138306 ... 157445 : + |
| To GenomeBrowser | scaffold511.1:138306..157445 |
| Genes list of scaffold | scaffold511.1 |
| Synonym | pfu_aug1.0_7323.1_52936 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_511.1_04270.t1 | 3 | 1 | Mcm10 | 110 | 145 | 0.0 | 239.3 | 1.3 | 3800.0 | -3.1 |
| pfu_aug2.0_511.1_04270.t1 | 3 | 2 | Mcm10 | 155 | 208 | 0.0 | 239.3 | 1.7e-06 | 0.0049 | 16.2 |
| pfu_aug2.0_511.1_04270.t1 | 3 | 3 | Mcm10 | 223 | 468 | 0.0 | 239.3 | 0.0 | 0.0 | 234.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_511.1_04270.t1 | gi|585675777|ref|XP_006818837.1| | PREDICTED: protein MCM10 homolog [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_511.1_04270.t1 | gi|390339728|ref|XP_782384.3| | PREDICTED: protein MCM10 homolog isoform X1 [Strongylocentrotus purpuratus] | 0.0 |
| pfu_aug2.0_511.1_04270.t1 | gi|58701913|gb|AAH90220.1| | LOC398196 protein [Xenopus laevis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_511.1_04270.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_511.1_04270.t1 atggtcgtcactttagttaatttactaaaacagccagtagagcttcagtctcatcagatacttctggtcggatatcggat catgaattacgatctgtttaagaaatgttcctattctggactagtttctcttcctgagaagaaacctgaactattccata aaacaaagctaataacctgctctattttaatcttaatggccgctgttacaccaaaaaatcatgtgtacaatcagaagaag aaccagcaaggattctttttctatggcggagaaaccttcaccaatatgagaccagtgtccagtaactctagtaatttagt aacagttaagaatctccaggctaagcaagcagctatgggtaaggggaagttaactaccatgtccctccataacatagcgg cctcggacaacaaacggctacagcagctccaggataaagacaatgctctagttgatctgctgtctactccaactgtagga tctatgaacatgatcaaacatctcatgaagaaggaaaatatggagaaggatcaacaagatgacaaaaagaagcctgccat acagtccatatctgccagggatctactcagacaacacaaagaagtgatgaggcaaaaattaaggccttcctccactggat ccaccccacctgtgaaccctcttaaagtggcccctgtacttggaaagggatgtaatgatgggctgattaaccttgacgcc cctagggtacccaaactatcagcaatgaaggcagagcaggctaagagaaaagccattcttcagattcaagaaaaaggagg tattcagaaagaagatcccaatgctgtgagaaaaaaatcctctccagaggcaagggagagaatacttaaacgtataaggg aggatgtagatcaagaaaacaaatctaaatcagctgaagaaccgccaaagaagaaatccaaacttttgggaaatattgat gaaaattctgaggagtttaaagccttgatgaagactaagtcaaggcatacaggggctctgaaagaggctgaaaaagaaat tgaagagaagtatttcatggagttagaaaagaaagagagatatgaagaaaagatgagctctataatggagatgaaatgta cagtatttacatgtaaaatatgtaactatacctcatttaagacctctgatagatgtaaagaggaacgacatcctatcaca aaagtacaagccacaaaacgattcttcaaatgtaaaaaatgtggtaaacgaacccacagcatccacaaactaccccaaga gccctgcagagggtgtggggagaacaattatgagaggacgtctatgttacaggagaggaaagggccaaaactacctcatg aaaacttgtgtattagaggagatgaagcaaagttcttaaattctatggatcagaaatcttacctgaacttgtga |
|
Protein
| Protein ID | pfu_aug2.0_511.1_04270.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_511.1_04270.t1 MVVTLVNLLKQPVELQSHQILLVGYRIMNYDLFKKCSYSGLVSLPEKKPELFHKTKLITCSILILMAAVTPKNHVYNQKK NQQGFFFYGGETFTNMRPVSSNSSNLVTVKNLQAKQAAMGKGKLTTMSLHNIAASDNKRLQQLQDKDNALVDLLSTPTVG SMNMIKHLMKKENMEKDQQDDKKKPAIQSISARDLLRQHKEVMRQKLRPSSTGSTPPVNPLKVAPVLGKGCNDGLINLDA PRVPKLSAMKAEQAKRKAILQIQEKGGIQKEDPNAVRKKSSPEARERILKRIREDVDQENKSKSAEEPPKKKSKLLGNID ENSEEFKALMKTKSRHTGALKEAEKEIEEKYFMELEKKERYEEKMSSIMEMKCTVFTCKICNYTSFKTSDRCKEERHPIT KVQATKRFFKCKKCGKRTHSIHKLPQEPCRGCGENNYERTSMLQERKGPKLPHENLCIRGDEAKFLNSMDQKSYLNL |
|