Gene
Gene Model ID | pfu_aug2.0_5137.1_26037 |
---|---|
Locus | scaffold5137.1 : 18736 ... 22728 : + |
To GenomeBrowser | scaffold5137.1:18736..22728 |
Genes list of scaffold | scaffold5137.1 |
Synonym | pfu_aug1.0_20054.1_61965 |
Manual annotation
Annotation by Blast2GO
Annotation | GO |
---|---|
complement c1q-like protein 2 | GO:0044763 GO:0048523 |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_5137.1_26037.t1 | 1 | 1 | C1q | 241 | 348 | 3.3e-19 | 69.1 | 8.8e-22 | 1.0e-18 | 67.5 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug2.0_5137.1_26037.t1 | gi|176866359|ref|NP_001116533.1| | cerebellin 13 [Danio rerio] | 8.0e-12 |
pfu_aug2.0_5137.1_26037.t1 | gi|158254222|gb|AAI54027.1| | LOC560655 protein [Danio rerio] | 2.0e-11 |
Transcript
Transcript ID | pfu_aug2.0_5137.1_26037.t1 |
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Definition | - |
>pfu_aug2.0_5137.1_26037.t1 atggagaacagcaccgcggtaggaacaaatgaagacgggtcatcagatgtaccaaaacagcccttgggaccggatgtttt cagacaacttctaaatcaggaaaccttgatccggatggctttggtaaagaacgtcaactcgctgatgctagatatggtat cgttgaaaaatagtgtaatgtcgctacagaaaactgttgaacagatcacaaaagtgtcggtggaagatataatgggactg aagcttgaaaacaaaaaacttaagaattcaaacgaactattgacggaaataaatcggaaacataaccaaacgatttcgaa actagtagatgacgtaaccgacttgaagaacgaacaaaagctctatgcaaaagaaatgataaatagagatgattatttat ttggtaacacatcagctgctttgtcggagctgaaaactaatttgcgcgttctttctctcagtctagtaaacgtcgacaat cagtcacaagatttcaaaaagcgtttgaatgaagttgacaaatctttgccacagacaataaatgagaaattcagtattgt ttcagaggcgatgaaaaatgcttcaaaccaattatcagagcgaacgaatgacagtttacagaatttaagatcagagcttg aggaatccaaccagagttatttaaggctgtcagcggctgttctatcactagaatggttcaaaaataatatatcgggaaaa tgtggtaatggctatgacccttcatccggagtttttaccgcacccaccaatggcgtctacgtcttctacgtttctttgac gtcatacgataccaacactatctacgtgtccattactctgaatggaaagtcaacggtatcagcttggggacgcggggaat ctggaggctcatatagaaataattattatactcgttaccagacgggtaccaatatggccgtcttatcattgatgcgaggc gatagagtatgggtacagtatgggtctggtactggctactacagcgacagtgtccctgtaacaaccttctctggttttat tatctag |
Protein
Protein ID | pfu_aug2.0_5137.1_26037.t1 |
---|---|
Definition | - |
>pfu_aug2.0_5137.1_26037.t1 MENSTAVGTNEDGSSDVPKQPLGPDVFRQLLNQETLIRMALVKNVNSLMLDMVSLKNSVMSLQKTVEQITKVSVEDIMGL KLENKKLKNSNELLTEINRKHNQTISKLVDDVTDLKNEQKLYAKEMINRDDYLFGNTSAALSELKTNLRVLSLSLVNVDN QSQDFKKRLNEVDKSLPQTINEKFSIVSEAMKNASNQLSERTNDSLQNLRSELEESNQSYLRLSAAVLSLEWFKNNISGK CGNGYDPSSGVFTAPTNGVYVFYVSLTSYDTNTIYVSITLNGKSTVSAWGRGESGGSYRNNYYTRYQTGTNMAVLSLMRG DRVWVQYGSGTGYYSDSVPVTTFSGFII |