Gene
| Gene Model ID | pfu_aug2.0_5137.1_26037 |
|---|---|
| Locus | scaffold5137.1 : 18736 ... 22728 : + |
| To GenomeBrowser | scaffold5137.1:18736..22728 |
| Genes list of scaffold | scaffold5137.1 |
| Synonym | pfu_aug1.0_20054.1_61965 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| complement c1q-like protein 2 | GO:0044763 GO:0048523 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_5137.1_26037.t1 | 1 | 1 | C1q | 241 | 348 | 3.3e-19 | 69.1 | 8.8e-22 | 1.0e-18 | 67.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_5137.1_26037.t1 | gi|176866359|ref|NP_001116533.1| | cerebellin 13 [Danio rerio] | 8.0e-12 |
| pfu_aug2.0_5137.1_26037.t1 | gi|158254222|gb|AAI54027.1| | LOC560655 protein [Danio rerio] | 2.0e-11 |
Transcript
| Transcript ID | pfu_aug2.0_5137.1_26037.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_5137.1_26037.t1 atggagaacagcaccgcggtaggaacaaatgaagacgggtcatcagatgtaccaaaacagcccttgggaccggatgtttt cagacaacttctaaatcaggaaaccttgatccggatggctttggtaaagaacgtcaactcgctgatgctagatatggtat cgttgaaaaatagtgtaatgtcgctacagaaaactgttgaacagatcacaaaagtgtcggtggaagatataatgggactg aagcttgaaaacaaaaaacttaagaattcaaacgaactattgacggaaataaatcggaaacataaccaaacgatttcgaa actagtagatgacgtaaccgacttgaagaacgaacaaaagctctatgcaaaagaaatgataaatagagatgattatttat ttggtaacacatcagctgctttgtcggagctgaaaactaatttgcgcgttctttctctcagtctagtaaacgtcgacaat cagtcacaagatttcaaaaagcgtttgaatgaagttgacaaatctttgccacagacaataaatgagaaattcagtattgt ttcagaggcgatgaaaaatgcttcaaaccaattatcagagcgaacgaatgacagtttacagaatttaagatcagagcttg aggaatccaaccagagttatttaaggctgtcagcggctgttctatcactagaatggttcaaaaataatatatcgggaaaa tgtggtaatggctatgacccttcatccggagtttttaccgcacccaccaatggcgtctacgtcttctacgtttctttgac gtcatacgataccaacactatctacgtgtccattactctgaatggaaagtcaacggtatcagcttggggacgcggggaat ctggaggctcatatagaaataattattatactcgttaccagacgggtaccaatatggccgtcttatcattgatgcgaggc gatagagtatgggtacagtatgggtctggtactggctactacagcgacagtgtccctgtaacaaccttctctggttttat tatctag |
|
Protein
| Protein ID | pfu_aug2.0_5137.1_26037.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_5137.1_26037.t1 MENSTAVGTNEDGSSDVPKQPLGPDVFRQLLNQETLIRMALVKNVNSLMLDMVSLKNSVMSLQKTVEQITKVSVEDIMGL KLENKKLKNSNELLTEINRKHNQTISKLVDDVTDLKNEQKLYAKEMINRDDYLFGNTSAALSELKTNLRVLSLSLVNVDN QSQDFKKRLNEVDKSLPQTINEKFSIVSEAMKNASNQLSERTNDSLQNLRSELEESNQSYLRLSAAVLSLEWFKNNISGK CGNGYDPSSGVFTAPTNGVYVFYVSLTSYDTNTIYVSITLNGKSTVSAWGRGESGGSYRNNYYTRYQTGTNMAVLSLMRG DRVWVQYGSGTGYYSDSVPVTTFSGFII |
|