Gene
| Gene Model ID | pfu_aug2.0_515.1_17510 |
|---|---|
| Locus | scaffold515.1 : 5726 ... 29398 : + |
| To GenomeBrowser | scaffold515.1:5726..29398 |
| Genes list of scaffold | scaffold515.1 |
| Synonym | pfu_aug1.0_26146.1_19111 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| sodium calcium exchanger 3-like | GO:0044699 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_515.1_17510.t1 | 1 | 1 | Na_Ca_ex | 45 | 204 | 1.5e-24 | 86.2 | 3.3e-28 | 2.4e-24 | 85.5 |
| pfu_aug2.0_515.1_17510.t1 | 3 | 1 | Calx-beta | 76 | 91 | 2.10195e-43 | 146.3 | 0.36 | 2700.0 | -1.7 |
| pfu_aug2.0_515.1_17510.t1 | 3 | 2 | Calx-beta | 296 | 386 | 2.10195e-43 | 146.3 | 2.1e-23 | 1.5e-19 | 69.7 |
| pfu_aug2.0_515.1_17510.t1 | 3 | 3 | Calx-beta | 401 | 499 | 2.10195e-43 | 146.3 | 8.5e-27 | 6.3e-23 | 80.6 |
Transcript
| Transcript ID | pfu_aug2.0_515.1_17510.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_515.1_17510.t1 atgtcaaccatagacctgaacaattacacttgttctgacgagggtttgatcttacctataatcaacgaatacacatgggc agaatgggtccgagcaactctatacatgataaccatgctctggtttttcatgggcgtagctatcgtggcagatgtcttca tgtgtggaatagaaaaaattacgagtaaaacacggatagtcaaaatccccgacccagagaaaaaagatgaagtgaaaaca atagaagtgaaagtatggaacgatactgtcgcaaatttgagtttaatggcgtttggtacaagcgcaccggaaatactgct gtctgtcattgaaataaccggaaattcatttaaatccagtgatttgggtccagggactattgtcggatcagccgctttta atctcctggtgataacaggagtctgtattgtttcaattccaaaaggagagactcggaaaataggaaatattcctgtctat gttactacaactttatttgccatgatggcttacatctggttgatcgtagtcctgaaggggattacaccaaacaaagtaga tatatatgaggccgttattacgttccttatgtttccggtcctcattttgacgtcatacgccgtagataagggatgtaacc gcagaaagacgtcatcagagctggaagtgggaataagtctcacaagagaaggaagcagtacagaaatcatacatctggcc aaggaactaggcagacagaaagatatgacggaggacgaggctgtggctctggccaccaagaagatactggcccaacagca ccataaccgtggatggtaccgtgtccacgcaacgagaggactcacgggtggacatagactcatacctaaagtcaaaaaga aatttaatgatgcagtggtggagtttacagcggcgtcatgtgctgtgctggagaacgaggggcaggtccgagtgggcatc aaacgatacggaaaactagacgtccctgtagaagtcatagctgaaacgatagacggatcagcagaagcagaaagtgacta caaacagttgaagcagaaagtgaagttttcaccaaacgagagacttcaggagatttttgtggagattattgacgatgacg tatgggagccggatgaaatgttctacgtcaaactgacgacggaagataaatcaatggtggtgatcggcaagacggaaatc acacagatcactattataaacgacgacgaacctggtaagttcgagtttactaagccgagttacatcgtccgtgacagtgt ggacactgcccaagtgtttgtcaaacgagttaatggcgccgatggtacggtgtctgtaagctggaaaacaaaggatatga cggctataacagggaaagactataacggaggggaaggcacgcttacattcggacatggggaaacttcaaaacctatagaa ataaaacttatggatacagatctagaggaaagagatcatagttttcaaatagagttgaaatctgctacaggtggagcaga cataggaaaaatcagcaaatgtattgttactctagtcaacgacgtagagtttgatggactggtatccagaatagccaaca agacatcaaaaggattggatggattacgtctggacacctcctcatggaaggaccagttcagagaggcactgaatgtaaat ggaggggatcttgacaatgcttcagtactggactatatccttcattttatctgcttcttttggaaagtctgggtctgccc tgggtcatggcatccatatactgggctgttaaggggaaacagtacacaaaacaactacacaaacaaacataccgacacac tgggaactaacacatcagaacgacaaataaacaaaacactactgaaacacgaagcacaacatcacaccaaaacgacaaac aagacaaaacactactggatcacgaagcaaaacatcagaccaaatggcaaacaagacaaacactaccggatcacgaaaca caacatcacatcaaaacgacaaaaactaacggattacgaagcacaacatcacaccaaaacgacaaaaactaacggattac gaagcacaacatcacaccaaaacgacaaacaagacaaaacactactggatcacgaacacaacatcacaccaaaacgacaa acaagacaaacgttaacactactggatcatgaagcacaacatcacatcaaaacgacaaacaagacaaacactacctga |
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Protein
| Protein ID | pfu_aug2.0_515.1_17510.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_515.1_17510.t1 MSTIDLNNYTCSDEGLILPIINEYTWAEWVRATLYMITMLWFFMGVAIVADVFMCGIEKITSKTRIVKIPDPEKKDEVKT IEVKVWNDTVANLSLMAFGTSAPEILLSVIEITGNSFKSSDLGPGTIVGSAAFNLLVITGVCIVSIPKGETRKIGNIPVY VTTTLFAMMAYIWLIVVLKGITPNKVDIYEAVITFLMFPVLILTSYAVDKGCNRRKTSSELEVGISLTREGSSTEIIHLA KELGRQKDMTEDEAVALATKKILAQQHHNRGWYRVHATRGLTGGHRLIPKVKKKFNDAVVEFTAASCAVLENEGQVRVGI KRYGKLDVPVEVIAETIDGSAEAESDYKQLKQKVKFSPNERLQEIFVEIIDDDVWEPDEMFYVKLTTEDKSMVVIGKTEI TQITIINDDEPGKFEFTKPSYIVRDSVDTAQVFVKRVNGADGTVSVSWKTKDMTAITGKDYNGGEGTLTFGHGETSKPIE IKLMDTDLEERDHSFQIELKSATGGADIGKISKCIVTLVNDVEFDGLVSRIANKTSKGLDGLRLDTSSWKDQFREALNVN GGDLDNASVLDYILHFICFFWKVWVCPGSWHPYTGLLRGNSTQNNYTNKHTDTLGTNTSERQINKTLLKHEAQHHTKTTN KTKHYWITKQNIRPNGKQDKHYRITKHNITSKRQKLTDYEAQHHTKTTKTNGLRSTTSHQNDKQDKTLLDHEHNITPKRQ TRQTLTLLDHEAQHHIKTTNKTNTT |
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