Gene
| Gene Model ID | pfu_aug2.0_515.1_17514 |
|---|---|
| Locus | scaffold515.1 : 238775 ... 242633 : + |
| To GenomeBrowser | scaffold515.1:238775..242633 |
| Genes list of scaffold | scaffold515.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_515.1_17514.t1 | 4 | 1 | LRR_8 | 10 | 30 | 4.7e-15 | 55.0 | 0.26 | 640.0 | 0.1 |
| pfu_aug2.0_515.1_17514.t1 | 7 | 1 | LRR_4 | 11 | 41 | 8.1e-10 | 38.0 | 8.5e-06 | 0.021 | 14.4 |
| pfu_aug2.0_515.1_17514.t1 | 4 | 2 | LRR_8 | 29 | 88 | 4.7e-15 | 55.0 | 1.2e-15 | 3.0e-12 | 46.1 |
| pfu_aug2.0_515.1_17514.t1 | 7 | 2 | LRR_4 | 30 | 69 | 8.1e-10 | 38.0 | 3.8e-10 | 9.4e-07 | 28.3 |
| pfu_aug2.0_515.1_17514.t1 | 7 | 3 | LRR_4 | 53 | 93 | 8.1e-10 | 38.0 | 1.5e-06 | 0.0038 | 16.8 |
| pfu_aug2.0_515.1_17514.t1 | 7 | 4 | LRR_4 | 153 | 162 | 8.1e-10 | 38.0 | 2.1 | 5100.0 | -2.8 |
| pfu_aug2.0_515.1_17514.t1 | 4 | 3 | LRR_8 | 280 | 330 | 4.7e-15 | 55.0 | 6.8e-06 | 0.017 | 14.8 |
| pfu_aug2.0_515.1_17514.t1 | 7 | 5 | LRR_4 | 280 | 291 | 8.1e-10 | 38.0 | 0.072 | 180.0 | 1.9 |
| pfu_aug2.0_515.1_17514.t1 | 7 | 6 | LRR_4 | 302 | 329 | 8.1e-10 | 38.0 | 0.015 | 36.0 | 4.1 |
| pfu_aug2.0_515.1_17514.t1 | 1 | 1 | TIR | 458 | 578 | 2.0e-07 | 30.5 | 1.3e-10 | 3.3e-07 | 29.8 |
| pfu_aug2.0_515.1_17514.t1 | 4 | 4 | LRR_8 | 531 | 555 | 4.7e-15 | 55.0 | 0.84 | 2100.0 | -1.5 |
| pfu_aug2.0_515.1_17514.t1 | 7 | 7 | LRR_4 | 559 | 573 | 8.1e-10 | 38.0 | 0.28 | 690.0 | 0.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_515.1_17514.t1 | gi|676482697|ref|XP_009062784.1| | hypothetical protein LOTGIDRAFT_167072 [Lottia gigantea] | 7.0e-17 |
Transcript
| Transcript ID | pfu_aug2.0_515.1_17514.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_515.1_17514.t1 atgtgtgattttagttctaactttgtcgtcattgatgtggcatataactcaatatcacagatctacaacatagaatgtct atggcgattagacacactggatctgtcatacaacaaacttacaatcttagctaacgaaacatttctaaacatgtcaaact taaggatccttgacgtttctcacaacaacataaaatccatggagcctgggttctttcgtggtacatcacggagtatttac aaagtcaacctttcgttcaaccacttcaagaaaatggacgtcagtaatgtaatatatccaaatgctacattctgctcttt gaactattcaaatgccatatttggtgattttacgaacgattttaaaatttcacttaaagagcatgagcgtattggatgtg gggatgtcgtgtttgacaactgtttattattgaggacacatctgaacgcgatattttctcttattcaaaatcagtttaca gatatttttaaatataatattcttggaaattttacatacaataacgtgtttataccgtgtgattgtacaattggtgaagc gatggctcgtgcggggttcattgatttttaccatatgtatcataaaaatgagttaggtgactacaaatgccgaagtccgg agagaatgaaagggattgatcttacagacgtgcacgattatcagacacttgaccagtttatctgtgtaaggtcaacgtat tgtcctgagaactgcacctgctttgagcaaccttcacagaatagatttgtcgtgaattgttcatatcaaagctactctga tctgccgtctcgattacctgtaacaaagtacccgtactacctggacttaacctctaatcatatcaaacatataagaaaca ggacatacacacatgaaataagtcatttattactggacggaaatgaagttcagaatttagactctgcatttcttgggtcg ttgagcagcattcaaatgctgaccttgaaagcacatgacctcctatcgcttcctaaagcgatagaaaaagtaagcgccaa taaaattatatttggacaaaacagtataccgtgtgactgtgattctgaatggatagcaagatggaggatctattccaagg ccaagtcacgtgacaaccccatgttttgtagaaacaatatcatcggaataaaacatgttgaagaaataatgaattatcta gattgctcaaaacatgttacatactatcaaatacctgttttagtaactcttttattactgcttgcctctatatcagtcac tatatttatttttaaggaagagttgcggattttgaaatgtagaatctcaaagtcgagaagaaaatcggtcagaaatggga ttaagtatgatgtcttcatctcgtttgatgaaaattctttggaaacgagaaattttgtggtaaggcacttgcgtacatac ctcattaatgaaggatattcgttgatcgtcccttgtatacaattgtctttcggcgattcgagagagaaggaaacagaaag tatgatgaaagaaacaaggtgtgtgatcatcgttctaacaaatggatacgggaaaaatgacaacagtccatggacaactt ttgaatacaatcgtgcacttaaaatgtattttgaattttcagacagcaatatcattcttgttaactttgagggtttgaac atatcgaacacttccttgccatatctaaaagcacttaaaacggttaatgggtgcttacacgtgacagatcgaaaacgttc aatttacgcatgcgtcaaagaaaaatgcggtgcaccaatccaaaaacagaagaagcaacggacgtcaagtgtcaggtata gatgttatcaaatgtctgagataaaagatgatgtgtggtaa |
|
Protein
| Protein ID | pfu_aug2.0_515.1_17514.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_515.1_17514.t1 MCDFSSNFVVIDVAYNSISQIYNIECLWRLDTLDLSYNKLTILANETFLNMSNLRILDVSHNNIKSMEPGFFRGTSRSIY KVNLSFNHFKKMDVSNVIYPNATFCSLNYSNAIFGDFTNDFKISLKEHERIGCGDVVFDNCLLLRTHLNAIFSLIQNQFT DIFKYNILGNFTYNNVFIPCDCTIGEAMARAGFIDFYHMYHKNELGDYKCRSPERMKGIDLTDVHDYQTLDQFICVRSTY CPENCTCFEQPSQNRFVVNCSYQSYSDLPSRLPVTKYPYYLDLTSNHIKHIRNRTYTHEISHLLLDGNEVQNLDSAFLGS LSSIQMLTLKAHDLLSLPKAIEKVSANKIIFGQNSIPCDCDSEWIARWRIYSKAKSRDNPMFCRNNIIGIKHVEEIMNYL DCSKHVTYYQIPVLVTLLLLLASISVTIFIFKEELRILKCRISKSRRKSVRNGIKYDVFISFDENSLETRNFVVRHLRTY LINEGYSLIVPCIQLSFGDSREKETESMMKETRCVIIVLTNGYGKNDNSPWTTFEYNRALKMYFEFSDSNIILVNFEGLN ISNTSLPYLKALKTVNGCLHVTDRKRSIYACVKEKCGAPIQKQKKQRTSSVRYRCYQMSEIKDDVW |
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