Gene
| Gene Model ID | pfu_aug2.0_515.1_17515 |
|---|---|
| Locus | scaffold515.1 : 245074 ... 259844 : - |
| To GenomeBrowser | scaffold515.1:245074..259844 |
| Genes list of scaffold | scaffold515.1 |
| Synonym | NA |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| eri1 exoribonuclease 2 isoform x1 | GO:0005488 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_515.1_17515.t2 | 1 | 1 | RNase_T | 14 | 176 | 1.1e-15 | 58.3 | 3.8e-19 | 1.9e-15 | 57.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_515.1_17515.t2 | gi|591379760|ref|XP_007064426.1| | PREDICTED: ERI1 exoribonuclease 2 [Chelonia mydas] | 0.0 |
| pfu_aug2.0_515.1_17515.t2 | gi|558162540|ref|XP_006123189.1| | PREDICTED: ERI1 exoribonuclease 2 isoform X1 [Pelodiscus sinensis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_515.1_17515.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_515.1_17515.t1 atgcttattgggtctcaagaacaaagtttttcatacctggtggtccttgattttgagtccacatgctggaaggaaaaata cagaacgcaggagattattgagtttccagctgttctcttgaatgtctatactggtgaagtagagagtgagttccattact atgtccagcctcaggaacagccggttctgagtgaattttgtcgacagcttacaggaattactcaggaacaagtagagaat ggaataccattggacatctgtttaaaaaagttctcccattggctaaatttcctgtacaaaacaaagaaagtggtatttaa acaaccaggaaatgaccaggaaaagtatgcaacatttgttacatggtctgattgggatttgggtacatgtctgttcaatg agtgtaagaggaaacagatacgccgtccaccacagcttaactcctggatagatctacgagctttatacaggccgacattt tcattcaataagcaaccaactattgtagctatttcaacaagctttctaattttggaaatgaaaaatatgtcatcagcttt tttggctagagaagcgaaaataaccacgtttttagctcgccaggacgaaaaagtccggacagctaatgccataccctcgg cgtcgtcgtcgttgttgtcgtcgtccgtagacaaaactttaacctgggctatatctcttgaactataa |
|
| Transcript ID | pfu_aug2.0_515.1_17515.t2 |
| Definition | - |
>pfu_aug2.0_515.1_17515.t2 atgcttattgggtctcaagaacaaagtttttcatacctggtggtccttgattttgagtccacatgctggaaggaaaaata cagaacgcaggagattattgagtttccagctgttctcttgaatgtctatactggtgaagtagagagtgagttccattact atgtccagcctcaggaacagccggttctgagtgaattttgtcgacagcttacaggaattactcaggaacaagtagagaat ggaataccattggacatctgtttaaaaaagttctcccattggctaaatttcctgtacaaaacaaagaaagtggtatttaa acaaccaggaaatgaccaggaaaagtatgcaacatttgttacatggtctgattgggatttgggtacatgtctgttcaatg agtgtaagaggaaacagatacgccgtccaccacagcttaactcctggatagatctacgagctttatacaggccgacattt tcattcaataagcaaccaactattgtagctatttcaacaagctttctaattttggaaatgaaaaatatgtcatcagcttt tttggctagagaaggtttacatgactccagaaacactgcaaaacttgcatggagaatgatgtgtgatggctgtgtaatga acattacgaagacactctcagggactaaagaatcacatcatgcgaaggtgttacaagacatcaaacaattaagtccaacc aggagtccagcacataaaaggcagaaaacggataacaattctaagactcgtgaacacagtgtgaaaacaccaaaaagaaa cacacacaaccttagaacaccaaaaaggaacacacagaatggtagcaaacacaatgttaggactccaaaaacaaacacac caagtcgtattcccttgcctgtatcctccagcagcaagaaagttggttttaaggtttttgaagattccagctcactgagt aaaccatcattagcgcttatgcaatcatgcatcaagaaaaagggggctttggatggaaatctgagggacaactga |
|
Protein
| Protein ID | pfu_aug2.0_515.1_17515.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_515.1_17515.t1 MLIGSQEQSFSYLVVLDFESTCWKEKYRTQEIIEFPAVLLNVYTGEVESEFHYYVQPQEQPVLSEFCRQLTGITQEQVEN GIPLDICLKKFSHWLNFLYKTKKVVFKQPGNDQEKYATFVTWSDWDLGTCLFNECKRKQIRRPPQLNSWIDLRALYRPTF SFNKQPTIVAISTSFLILEMKNMSSAFLAREAKITTFLARQDEKVRTANAIPSASSSLLSSSVDKTLTWAISLEL |
|
| Protein ID | pfu_aug2.0_515.1_17515.t2 |
| Definition | - |
>pfu_aug2.0_515.1_17515.t2 MLIGSQEQSFSYLVVLDFESTCWKEKYRTQEIIEFPAVLLNVYTGEVESEFHYYVQPQEQPVLSEFCRQLTGITQEQVEN GIPLDICLKKFSHWLNFLYKTKKVVFKQPGNDQEKYATFVTWSDWDLGTCLFNECKRKQIRRPPQLNSWIDLRALYRPTF SFNKQPTIVAISTSFLILEMKNMSSAFLAREGLHDSRNTAKLAWRMMCDGCVMNITKTLSGTKESHHAKVLQDIKQLSPT RSPAHKRQKTDNNSKTREHSVKTPKRNTHNLRTPKRNTQNGSKHNVRTPKTNTPSRIPLPVSSSSKKVGFKVFEDSSSLS KPSLALMQSCIKKKGALDGNLRDN |
|