Gene
| Gene Model ID | pfu_aug2.0_516.1_20861 |
|---|---|
| Locus | scaffold516.1 : 229192 ... 249304 : + |
| To GenomeBrowser | scaffold516.1:229192..249304 |
| Genes list of scaffold | scaffold516.1 |
| Synonym | pfu_aug1.0_4884.1_23679 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_516.1_20861.t1 | 3 | 1 | Vitellogenin_N | 9 | 663 | 0.0 | 299.9 | 0.0 | 0.0 | 299.9 |
| pfu_aug2.0_516.1_20861.t1 | 5 | 1 | DUF1943 | 494 | 543 | 0.0 | 159.2 | 0.1 | 380.0 | -0.3 |
| pfu_aug2.0_516.1_20861.t1 | 5 | 2 | DUF1943 | 695 | 1004 | 0.0 | 159.2 | 0.0 | 0.0 | 159.2 |
| pfu_aug2.0_516.1_20861.t1 | 3 | 2 | Vitellogenin_N | 1243 | 1334 | 0.0 | 299.9 | 4.0 | 15000.0 | -10.7 |
| pfu_aug2.0_516.1_20861.t1 | 5 | 3 | DUF1943 | 1477 | 1477 | 0.0 | 159.2 | 4.0 | 15000.0 | -6.5 |
| pfu_aug2.0_516.1_20861.t1 | 3 | 3 | Vitellogenin_N | 1498 | 1649 | 0.0 | 299.9 | 4.0 | 15000.0 | -37.3 |
| pfu_aug2.0_516.1_20861.t1 | 3 | 1 | VWD | 1536 | 1593 | 2.9e-15 | 56.8 | 2.4 | 8800.0 | -3.3 |
| pfu_aug2.0_516.1_20861.t1 | 5 | 4 | DUF1943 | 1580 | 1602 | 0.0 | 159.2 | 0.91 | 3400.0 | -3.4 |
| pfu_aug2.0_516.1_20861.t1 | 3 | 2 | VWD | 1724 | 1772 | 2.9e-15 | 56.8 | 0.94 | 3500.0 | -2.0 |
| pfu_aug2.0_516.1_20861.t1 | 5 | 5 | DUF1943 | 1836 | 1903 | 0.0 | 159.2 | 4.0 | 15000.0 | -5.6 |
| pfu_aug2.0_516.1_20861.t1 | 3 | 3 | VWD | 2117 | 2280 | 2.9e-15 | 56.8 | 7.7e-19 | 2.9e-15 | 56.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_516.1_20861.t1 | gi|24475539|dbj|BAC22716.1| | vitellogenin [Crassostrea gigas] | 0.0 |
| pfu_aug2.0_516.1_20861.t1 | gi|291243037|ref|XP_002741413.1| | PREDICTED: vitellogenin-1-like isoform X1 [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_516.1_20861.t1 | gi|585712316|ref|XP_006824894.1| | PREDICTED: vitellogenin-1-like isoform X2 [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_516.1_20861.t1 | gi|676439363|ref|XP_009048828.1| | hypothetical protein LOTGIDRAFT_230838 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_516.1_20861.t1 | gi|260809787|ref|XP_002599686.1| | hypothetical protein BRAFLDRAFT_70363 [Branchiostoma floridae] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_516.1_20861.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_516.1_20861.t1 atggttgttatttgttcgtcagcttacacgccgggtaaggagtatgagtatgactatgagactcagatagtgacaggagt acccggcggaagtaagatatactcaggactcaagctcaaggcaaaactcaaattccaactcaaatctgcctcagatttgg agagaataagattcttaaagataaatgatccaatcgagtccgctgatcccactaaggagacgatccctgacgatgctttc cggacaatgacagaacctgaggcggacaaaatgaaggccgatctccataaaccaatcaagttcaaatatcacaatggcca ggtgacagactttgtcacagaatctgatgaccctgagtattcagtcaacatgaaacgaggtcttctcagcgtgtttcagc tgaacctggatggtcggaaaagtactcaaccacctcgtagtgatccccagaccccggggccatataaccaatatatggtt atggagactagtgtctcaggagagtgtgagacactttataaggtgaccacctccccatatccacgcggcatgccagcatt caaaataagtaaagtaaggaactatgagaagtgcttggagcgaccacagctcaccaggagtatgttcagcggtatgaagt gtgctcagtgtgagcgagacaagtcagaaccgttgaaagctagtacagaaattcgttactacatgcgagggacggccaat cagttcctgatacagagcgctattggtgaaagccggtatttcttcactatgtattccgaccagggaggaaatgccgcttc attcatcaaccaaacgttataccttaccgacacgagatccatacagcaaccaatctctctttccacgagtccaaaacaac acagtcggggactgaaagcgaccgtaccacggcagccggaatccacaagtcctcaaagtccgtcctctcctagctctccc aggaaacaaacactgactccggaggaacgcatgagaattaaaacaaagataatcaaacagctagatgccttggcagtgtt cagtagcccggatgtcaaggaagaggcgggaccaacattaattgaattggcaaaggaaatgaggaaggcagattcttctg tcttagaagacgtttataaagttatcaagtctaaatcagcaccaaaaatggcattattaaggaaagcatactacgattta ctccctgctttgggaacatatgattcggtagaaatgttggcgaagctgatagagaccagagagatgggacatagtgaagc agccacctccttcaacatggtagctgtttctgctcagccggaggtcgccatagcaaagaaaatattggaattattgaaaa gaaaggacgttctggataacagggagctaaaacgatcagcattcctggctttaggtgccattggtaaccgtatcaatgtg gacgcaaagaaaaaagtcaaggatatcacacgaaaacaagaacttctccagaaattgtcacgcaactctcaacagcagaa gagcgttcaagagttacagaccaaattacagaaattaaaacaaattaagacccagattgagtcagagttagtcacattga agcaggatatcatcaaggaaatactggacttgcttaaatctccggaaagcgacgacagaatgatggctctgaaaacggca ggaaatgctggctttaaagaacatattccacatattcgttctatcatagaaaacaagaataaacctctcctagagagagt acaagccatattcagtctcaggaagttggccaatgaagaaccaaaaattgtactagacattctgcttccaagatattttg atcgttctgaccgtgaagaaatccgcatcagttcatacctagtgtccgctggggctagcccaagtcgaccagttttagaa atgattgccgagtacttacgaacggagccgaatccccatgtcggaacgttcgtcttcacacatctggagcaactgtcgaa ctcaactcatccatgcctcatgtcatgggccaagaatgctacttatgctctgaagtttagtagaaagttttctccttctt accactactcaaggtttatccatctcccttattatgacgactatacaaagattggaggtgctttagagttgggcttcatt acttcgccagacgaattcatcccacgtgcaggcgcagctcatctgaaccttcatatactcggatcatcatacaatatagg agagattggctttaataccgagggtctacagaaaattgcctcaaagatactaggtccagatggagtattagctcatggta aatcattggtagatctcctgaaagaacgtcatccaagaagcacgtcccccaagataaatcctgtagaggacgcccaccga cggctcaatgtttcaccacggaataccccagatccagagggtcacatctattttaaactatttggcaatgagttgaggta ttaccaaatagacaggaaaactgtgaccgatcttattatgaaagaatttttcttttttccccaccaagacgcaataaaaa caggcacagttgaagaggagctatctgccgggaaaccaatgtcagcacagagcaccatgatgctggctgattccattcac gtggtgatgacggaggctggcctccctttgagactcaggctggacggtgtggtgatgaccaagatacatggaaagatgac actgacaggagctccatcgctgttcaaaagtcgccgtcctcaacaaaacgttggcgagatggagatgaaattcgacatca caccaagtgctgttctgaatgtccgtggtgagatggaaatggacggaaaatacttcaagacaggagctgctataaacttc atgctacagacagacacaccgttgtcttttgatattggtaccgacattaggaaaagaaaattatttacgaaagtcaacat ggagaagatgagagaaagactattgaaaatggaatcccttccttacacatttatccggcgagatcctctcaacatcaccg aatacccaacattgccagacaagaaggacatagaagtggcggatggagcaatgaaattcccggtatctaaggactttggg acaaatgagttaggttataccttttcacttagaggtgaacacgttgtgcgtaacttccttcaaggtgtcccatactgtcc actcagtggaaaacaacagtattacatgacgctatctccagggtacaaaccacagaaatatgctgaacttcagttgcagc tattatattctatagaaaagaaacctagatcgtcttcgccttctgtctcatcatctcctccaagttcttctcagccaagc gaaagcagtggtgtcctgtcatggctgagtagcttactgggaagtgaagatgattccgctccgcagtcggcaaattcacc caagcagaatcaaaagggccccgtttctgatcttagaacctcagattcatcaatatcaaagctagagaaagaactaaaac agagtcaacaagacgattcacttttggacgatagaaaatctggattcgcacttaatctaatgactgtgaatgacaacaga acttctgatagaaaggcccagatgtcggttctctttgaatctacgatggataaagctgcggacaaattacatttcagttt ttaccgtacacctattcccggaaaggagactgatccatggaaaatgactgcgaagatggatttaacctacccaaagatga caaccgatccttcagatctcttgaagtcgtcctaccaagaaaagatacatcgtcttataaaaaagtacacaaaacaagat gcactggatcaacttagtgttcacttgaaagagcaactacctctcaagcaatcaaaacttgcgagtaaaattcagagttc ggcaaatactagatcaatagtcaacgaagttctcagaactgtgctggaacaagccccaaaatcagcagatccagaagtcc ttaagaaagcagttttacagcagcaagatattcatagcatacttcatgatgttgtacgaagactgagaaccagtataacc caatctgagaggagaagcattgatcagaaaatatcactcaatgtccgatcattgaaagacctcataagttctcagaccga tttaaaacggacacctgtttcagagattgttactgctgtgaagactccgagtccagaacaggagcagctggcaagaaagt tatcacagctacaacagaaacaagatgaacatttacgggacatatcaagtaggaaaggtgttgacagtgttctcagtgta gatgaaacaaaagtaagaagtgttctgaacaaacttagggaagttgaacaagaaattgaaggcctaccagtttcatccaa aataatacatgatgcggtgctaaaacaacttttagatgcatcattacaacaggaacaaatcactaaggaactccgccgaa ttcaaaaggactctccaatcttaatgcaaagtgaaaagatcaaggcgaaaacactttcgagtcttgtcaaagagattaag cagaaaagtaattctatatcaaagattcttgctcaagtaacacatcataaacaagaacttcgggttctctcaaaaacaag ttcaaaagaggagaaaacacttcttttaagactacagaaagtcgaactgttacaagtcatgtctctaagaaaactgagtt cttccaataaagtttcaatttccaaaacttcaagtaaacaggataggaaaactgaaattcaaaattctatgcgaaaggct gtaaaagcaggacaacttttagaacagacacttttattgcttaaaaatcaagatcagactcctgaacttttgataaaggc cattaaagtatcacaaacacaggcagacttgatggataaactcgagaaggcagcacaggaagtgagaatacgactggtag cagaatcatccaggaacgacccggaactggataagattgagaaacaagccgctgtaagaaaattagaactcatttctgca atacagcagcatctttctgtaaccaagtcgcgaagatcaatcctcaacatagacgaaatcgagacacttaaagaagtaca tagagacttggaggacatcagacgagatcaacgtaaagtacaagcagatgttaggcaaatagctgagttaaagaatgtca agaaagctcctcaaaaggtgtcgaaagttattttgaaactgaaggatgttagaaatcaaataaataaattacaacgacaa atgcaaaatagtcgtctgcatgagaaaataaaagatgtcattgaagatttgaaagatgcgactcgagttcaaagacgaat aattaaaagtctcaatgataccctcaaagtagtaaaggatcgaggatctagattgtcgcttgctcagatgctcaaggctc agtctaaaagtatagacagaatcgagaaacaaacagagcagttagaaaacggcatcgacacatctcagagttcaaatata agcaaaacttccaggcggagatggtcagccaaatcgaataatatccgatcaaacagttcagggcaacaagatcctacttc tagtcaatcttcatctaaatcgaaacaaagttctaagcagcagtctccagattccagcaaagcacgtgttcagtcggata ccaataagaagtcacaaagagcacgtcagaccctctcgacgaaacttgcagtcggaagctcgtcatctcagggacaggat gatcagataaaggctgccttggaaatagaatttggaagtgtaggagaacatccaaaatctatactcatacagatggttgg caaaaagtcgcttgagcagctcctgtgggaaagcgatcaaatctcgccgatatcgagaagtgaggttacaaaacgttatc ttgacgacgaagaggaaggggaggaggaaataaagggatcgtacaaacgacttagaaatgaagtcaacctctttaggcat attcatttcaatgttaaatacccaatggacgaaatgccgcagtatttacgtgaaatgtccaagcatcttaaggaatttat gaagtacagtttgtatgagcatctcatctcctcacttcctgatcctgtttacaggaaggacaaagcagaattcattatag tctacaaaaggaatgatagacaggttgatatgatgctgaaaacctatgatgaaacggaccaattccggggtgtcaccatt ccatattatgctaagatgtatctcgagggattgagaacacgtcagagcaaatcatccaataggctacaggaaacgttaga aaaagtcaccaaaaatttaccaggtacctgcgaggtcaagaagtccctcatcaaatcactagatggtaaagagtacagac taccggaaacaggcagctgtgacgtcattctgtctatggattgttcctcgacaaaggcttttgtcgtcaaagccaggaaa aacgcacaacttccagataaaagggatgttgaaatttcggcggaaggtagaatagtgaaggtgataccagaaagtcagtc cgttcgtgtacaggtggatggacagacagaagacgtacagttgaacaaaccattggtagttagagaaagtcagcctcaag gaagccataagcatgtactgttagaggtcgtaagagtgaagaccaacaaaattagggtaattgttcctaggaaaggctta caagtagaatcagatggaataaaagttgacgtcaaggtttcaccatttcactattcccgtgtgtgtggtgtgtgcggtaa ctacgacgggaagtccgataacgagtacgagacaccagaacgagatattcactcagatcccaaatgttttgtcctaagtt acgtcatgagtaacccgaggtgtaacgccgacagcctcaagtcacagtgtcgtcatctaccccagagcagccgcacaggt ccctgcagtctgaaacaggaaaccataaagcgtgaacgaaccaactcctctcaaccggaagtatgttactccgtagaacc agtcaagaaatgtgatcctggctgcaaaccacgggactcgagacctaaatcggtacagatgcactgtctgtcgaagactg atccgcaggtgccaagacttgaaagagaccgtcagagccgggttttatccgaactccaaggacaatctgtagattactct gtccgtgtacaggaaccaagacgatgtcgtgatctgtag |
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Protein
| Protein ID | pfu_aug2.0_516.1_20861.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_516.1_20861.t1 MVVICSSAYTPGKEYEYDYETQIVTGVPGGSKIYSGLKLKAKLKFQLKSASDLERIRFLKINDPIESADPTKETIPDDAF RTMTEPEADKMKADLHKPIKFKYHNGQVTDFVTESDDPEYSVNMKRGLLSVFQLNLDGRKSTQPPRSDPQTPGPYNQYMV METSVSGECETLYKVTTSPYPRGMPAFKISKVRNYEKCLERPQLTRSMFSGMKCAQCERDKSEPLKASTEIRYYMRGTAN QFLIQSAIGESRYFFTMYSDQGGNAASFINQTLYLTDTRSIQQPISLSTSPKQHSRGLKATVPRQPESTSPQSPSSPSSP RKQTLTPEERMRIKTKIIKQLDALAVFSSPDVKEEAGPTLIELAKEMRKADSSVLEDVYKVIKSKSAPKMALLRKAYYDL LPALGTYDSVEMLAKLIETREMGHSEAATSFNMVAVSAQPEVAIAKKILELLKRKDVLDNRELKRSAFLALGAIGNRINV DAKKKVKDITRKQELLQKLSRNSQQQKSVQELQTKLQKLKQIKTQIESELVTLKQDIIKEILDLLKSPESDDRMMALKTA GNAGFKEHIPHIRSIIENKNKPLLERVQAIFSLRKLANEEPKIVLDILLPRYFDRSDREEIRISSYLVSAGASPSRPVLE MIAEYLRTEPNPHVGTFVFTHLEQLSNSTHPCLMSWAKNATYALKFSRKFSPSYHYSRFIHLPYYDDYTKIGGALELGFI TSPDEFIPRAGAAHLNLHILGSSYNIGEIGFNTEGLQKIASKILGPDGVLAHGKSLVDLLKERHPRSTSPKINPVEDAHR RLNVSPRNTPDPEGHIYFKLFGNELRYYQIDRKTVTDLIMKEFFFFPHQDAIKTGTVEEELSAGKPMSAQSTMMLADSIH VVMTEAGLPLRLRLDGVVMTKIHGKMTLTGAPSLFKSRRPQQNVGEMEMKFDITPSAVLNVRGEMEMDGKYFKTGAAINF MLQTDTPLSFDIGTDIRKRKLFTKVNMEKMRERLLKMESLPYTFIRRDPLNITEYPTLPDKKDIEVADGAMKFPVSKDFG TNELGYTFSLRGEHVVRNFLQGVPYCPLSGKQQYYMTLSPGYKPQKYAELQLQLLYSIEKKPRSSSPSVSSSPPSSSQPS ESSGVLSWLSSLLGSEDDSAPQSANSPKQNQKGPVSDLRTSDSSISKLEKELKQSQQDDSLLDDRKSGFALNLMTVNDNR TSDRKAQMSVLFESTMDKAADKLHFSFYRTPIPGKETDPWKMTAKMDLTYPKMTTDPSDLLKSSYQEKIHRLIKKYTKQD ALDQLSVHLKEQLPLKQSKLASKIQSSANTRSIVNEVLRTVLEQAPKSADPEVLKKAVLQQQDIHSILHDVVRRLRTSIT QSERRSIDQKISLNVRSLKDLISSQTDLKRTPVSEIVTAVKTPSPEQEQLARKLSQLQQKQDEHLRDISSRKGVDSVLSV DETKVRSVLNKLREVEQEIEGLPVSSKIIHDAVLKQLLDASLQQEQITKELRRIQKDSPILMQSEKIKAKTLSSLVKEIK QKSNSISKILAQVTHHKQELRVLSKTSSKEEKTLLLRLQKVELLQVMSLRKLSSSNKVSISKTSSKQDRKTEIQNSMRKA VKAGQLLEQTLLLLKNQDQTPELLIKAIKVSQTQADLMDKLEKAAQEVRIRLVAESSRNDPELDKIEKQAAVRKLELISA IQQHLSVTKSRRSILNIDEIETLKEVHRDLEDIRRDQRKVQADVRQIAELKNVKKAPQKVSKVILKLKDVRNQINKLQRQ MQNSRLHEKIKDVIEDLKDATRVQRRIIKSLNDTLKVVKDRGSRLSLAQMLKAQSKSIDRIEKQTEQLENGIDTSQSSNI SKTSRRRWSAKSNNIRSNSSGQQDPTSSQSSSKSKQSSKQQSPDSSKARVQSDTNKKSQRARQTLSTKLAVGSSSSQGQD DQIKAALEIEFGSVGEHPKSILIQMVGKKSLEQLLWESDQISPISRSEVTKRYLDDEEEGEEEIKGSYKRLRNEVNLFRH IHFNVKYPMDEMPQYLREMSKHLKEFMKYSLYEHLISSLPDPVYRKDKAEFIIVYKRNDRQVDMMLKTYDETDQFRGVTI PYYAKMYLEGLRTRQSKSSNRLQETLEKVTKNLPGTCEVKKSLIKSLDGKEYRLPETGSCDVILSMDCSSTKAFVVKARK NAQLPDKRDVEISAEGRIVKVIPESQSVRVQVDGQTEDVQLNKPLVVRESQPQGSHKHVLLEVVRVKTNKIRVIVPRKGL QVESDGIKVDVKVSPFHYSRVCGVCGNYDGKSDNEYETPERDIHSDPKCFVLSYVMSNPRCNADSLKSQCRHLPQSSRTG PCSLKQETIKRERTNSSQPEVCYSVEPVKKCDPGCKPRDSRPKSVQMHCLSKTDPQVPRLERDRQSRVLSELQGQSVDYS VRVQEPRRCRDL |
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