Gene
| Gene Model ID | pfu_aug2.0_5161.1_06086 |
|---|---|
| Locus | scaffold5161.1 : 22216 ... 29816 : + |
| To GenomeBrowser | scaffold5161.1:22216..29816 |
| Genes list of scaffold | scaffold5161.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_5161.1_06086.t1 | 1 | 1 | C1q | 121 | 251 | 1.1e-17 | 64.2 | 1.0e-21 | 1.5e-17 | 63.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_5161.1_06086.t1 | gi|585702948|ref|XP_006823159.1| | PREDICTED: complement C1q-like protein 4-like [Saccoglossus kowalevskii] | 6.0e-09 |
| pfu_aug2.0_5161.1_06086.t1 | gi|597791630|ref|XP_007258941.1| | PREDICTED: complement C1q tumor necrosis factor-related protein 5 [Astyanax mexicanus] | 2.0e-07 |
| pfu_aug2.0_5161.1_06086.t1 | gi|512853438|ref|XP_002935065.2| | PREDICTED: complement C1q tumor necrosis factor-related protein 5 [Xenopus (Silurana) tropicalis] | 1.0e-06 |
Transcript
| Transcript ID | pfu_aug2.0_5161.1_06086.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_5161.1_06086.t1 atgagtccaattcgaaaaatgtacgacttatttggtcatttcgatataagactttatggatgccagagagttgcgattgc aacaaaggatcgccatctgaagtatagatgcgggatgctgaaggcaagaatcccaagtaccaacatctggactcggatac agaatatgatgatgaagcccctaaaaaagaagagaaatgaacacgctcccctgaggccgtcgccacggaaaatgacgaaa actttatttgggccttctgattctgtggatgaagaaagattaaaggaccacttaggcggtcacgaaagaagaatgaatcc ccaaggattccattcgtgctatacaacccctacaaatgttgcattcatggcccgattgacacataacatcacgaatcctc ctgttggacaaacagtggtatttaatgaagaaaatctagacacagccaacagctatgacccaaacagcggtatattcaac gttcctgtaagtggagtttactacatttctctaacagccgctactaatgaggagaaagatttacactatctgcacctcta cataaagaaagatggtactgcgattggttatcttctccttgacgaaaatgatgatttctggttaagacgaaatgaagtta tcctggttcaccttaatgctggagacactgtgtacgtccaaatagatctcgcaaatggaccttgtacgttaattggaggt ggaatgaccactcgtttccaaggatatatgatttttcgggattga |
|
Protein
| Protein ID | pfu_aug2.0_5161.1_06086.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_5161.1_06086.t1 MSPIRKMYDLFGHFDIRLYGCQRVAIATKDRHLKYRCGMLKARIPSTNIWTRIQNMMMKPLKKKRNEHAPLRPSPRKMTK TLFGPSDSVDEERLKDHLGGHERRMNPQGFHSCYTTPTNVAFMARLTHNITNPPVGQTVVFNEENLDTANSYDPNSGIFN VPVSGVYYISLTAATNEEKDLHYLHLYIKKDGTAIGYLLLDENDDFWLRRNEVILVHLNAGDTVYVQIDLANGPCTLIGG GMTTRFQGYMIFRD |
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