Gene
| Gene Model ID | pfu_aug2.0_517.1_24127 |
|---|---|
| Locus | scaffold517.1 : 203217 ... 216210 : + |
| To GenomeBrowser | scaffold517.1:203217..216210 |
| Genes list of scaffold | scaffold517.1 |
| Synonym | pfu_aug1.0_4882.1_23678 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_517.1_24127.t1 | 5 | 1 | WD40 | 24 | 39 | 7.1e-11 | 41.5 | 0.21 | 510.0 | 0.7 |
| pfu_aug2.0_517.1_24127.t1 | 5 | 2 | WD40 | 63 | 83 | 7.1e-11 | 41.5 | 0.013 | 32.0 | 4.6 |
| pfu_aug2.0_517.1_24127.t1 | 5 | 3 | WD40 | 168 | 182 | 7.1e-11 | 41.5 | 0.1 | 250.0 | 1.7 |
| pfu_aug2.0_517.1_24127.t1 | 5 | 4 | WD40 | 217 | 253 | 7.1e-11 | 41.5 | 2.8e-07 | 0.0007 | 19.3 |
| pfu_aug2.0_517.1_24127.t1 | 5 | 5 | WD40 | 322 | 347 | 7.1e-11 | 41.5 | 0.00072 | 1.8 | 8.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_517.1_24127.t1 | gi|676488807|ref|XP_009064736.1| | hypothetical protein LOTGIDRAFT_236208 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_517.1_24127.t1 | gi|585711393|ref|XP_002741255.2| | PREDICTED: WD repeat-containing protein 75-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_517.1_24127.t1 | gi|390339964|ref|XP_003725139.1| | 0.0 | |
| pfu_aug2.0_517.1_24127.t1 | gi|390339966|ref|XP_798367.3| | 0.0 | |
| pfu_aug2.0_517.1_24127.t1 | gi|524870000|ref|XP_005091786.1| | PREDICTED: WD repeat-containing protein 75-like [Aplysia californica] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_517.1_24127.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_517.1_24127.t1 atgtgtagccatgcacccaacaaacaactgtgtcgttactgggacccaagatgggaaaatatactactgtttactgctga aggatcctacctactttccggtggccatgagtgtgtactggtcaagtggcagtttgacaataataatagagaatacctac cccgtcttggggccccattatgttacatcacttgttcccctgacaaccagatgtatgctacatgtcaccatgacaacgtg gtcaacttgatttctaataagttcaagcttctacaagtgtaccaaggactaacagttggtcaccttgttcaccagaagag gaaccgtacaccgtgtggtttacttcaagatccccgtacaaaagctctggttactaacggcaaacccggtcatcttcagt tctacttggtagacagtgacaaacaactgtataatcttgatattgtttgtgaaaattacatttctcctgagaatttaaaa cgaccaacagttgtaacagaggtcacaaatgctgcattcagctccaatggtcactggctcgcgacgttacagctgtggga taacggagttatgtcccctgaaatgatccttaaattctggttctacaatgaggaaacacaaagttttatgttgaatacaa tggttgacacgccccattcagctcctgtgaattctttgaaattccgcccctacaatcctgaaattccggcctcaccgatg gttgtcacatcaagtcaggatgggaaattcaagtgctgggttctaactgatgacacagatatttatcgagagaacagcaa gtggatgtgtgagtcagttggttactatagagacagagaagggggtgtggctagttttactgaggatggatccctattgg ctgtagtttttggttctgtaataacattatggaatcctgataacaacatactgagacggacactgtcagcttcaccagaa gctagcaatattaatcatatagagtttggtcatggtacgtgctgtcattatctagtatcctgctctaaagaccagcttgt agtgtgggaccttagatcttgtacagtatcgtggagtgtagatctgaacgtctccctacttctgagtgatccccagacag acaacatggcaatcatcacaagtgatcatacattgtatattttccaactatccaatccggagccatcttatactcacaaa tctctgtgtgatgataaagtggtctgcggggtcttcatacctcactctgggaagaaggaatacaaagggacacaactgca atggcagtcacagtcccggctgtatctgcttacggcaaaacaaaagttgttgacgttactttttgaagaggaagtcaagg atgacaagtcttatcaacaaatgaaactaacccccagtcttccacagacaccattcagtttactcatgtctaaagagaga aagactggagtcagcgcaacggacagacacagtcaagatgctgtgccttctggacaatttactcaagagctcatcatggc agcccctcacacacagcctaatgtctccttgttgtgtaataaattcatccaatccttactcatcagaactagaaaaaatg gaaacaaagatgacgacaaagatgatgaggatgaggaggaggaggatagtgatgacaaatctcattctgactctgattct gatatggaagtcgatagcaaagttaccggcagacaaaggggtactcaagacgctaagactgactcccatgatgcaacagg caatatagtcagtccctcggacaatttcttgtgcagtgaaggacagaatttacaggaggattacttagaaaaagcgttat cacaaactgaatacagttggttgactccactgaatacctga |
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Protein
| Protein ID | pfu_aug2.0_517.1_24127.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_517.1_24127.t1 MCSHAPNKQLCRYWDPRWENILLFTAEGSYLLSGGHECVLVKWQFDNNNREYLPRLGAPLCYITCSPDNQMYATCHHDNV VNLISNKFKLLQVYQGLTVGHLVHQKRNRTPCGLLQDPRTKALVTNGKPGHLQFYLVDSDKQLYNLDIVCENYISPENLK RPTVVTEVTNAAFSSNGHWLATLQLWDNGVMSPEMILKFWFYNEETQSFMLNTMVDTPHSAPVNSLKFRPYNPEIPASPM VVTSSQDGKFKCWVLTDDTDIYRENSKWMCESVGYYRDREGGVASFTEDGSLLAVVFGSVITLWNPDNNILRRTLSASPE ASNINHIEFGHGTCCHYLVSCSKDQLVVWDLRSCTVSWSVDLNVSLLLSDPQTDNMAIITSDHTLYIFQLSNPEPSYTHK SLCDDKVVCGVFIPHSGKKEYKGTQLQWQSQSRLYLLTAKQKLLTLLFEEEVKDDKSYQQMKLTPSLPQTPFSLLMSKER KTGVSATDRHSQDAVPSGQFTQELIMAAPHTQPNVSLLCNKFIQSLLIRTRKNGNKDDDKDDEDEEEEDSDDKSHSDSDS DMEVDSKVTGRQRGTQDAKTDSHDATGNIVSPSDNFLCSEGQNLQEDYLEKALSQTEYSWLTPLNT |
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