Gene
| Gene Model ID | pfu_aug2.0_517.1_24130 |
|---|---|
| Locus | scaffold517.1 : 258245 ... 263576 : - |
| To GenomeBrowser | scaffold517.1:258245..263576 |
| Genes list of scaffold | scaffold517.1 |
| Synonym | pfu_aug1.0_19777.1_04036 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_517.1_24130.t1 | 1 | 1 | Exo_endo_phos_2 | 395 | 516 | 2.2e-12 | 46.6 | 3.7e-15 | 9.1e-12 | 44.6 |
| pfu_aug2.0_517.1_24130.t1 | 1 | 1 | RVT_1 | 824 | 964 | 1.6e-29 | 102.7 | 1.9e-32 | 4.8e-29 | 101.2 |
Transcript
| Transcript ID | pfu_aug2.0_517.1_24130.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_517.1_24130.t1 atgtctcaaataaaagatggcggacaacaatttagccaaggagccaggcgaggaagaccacccaaaaataaaagtgtttc acaaactaactctagaaacaattcggtaaacaataccccagatgtttctccaaacagaaactcaaacttgaacaaacaag acgcggaatcggacgaggtttggtcatgtgcaatttgcagtcaacttttcgacgatccggaatccaaaatattggaatgt gaaagatgcagacaacattattgcatctcgtgcttgaataaaactatagaagaatataattgtctcagcaagtcggattc tatgtggttttgtgctaaatgtagacagattgtagagaagaatattgctattgacataaagatagaggaaaggttggagg aaacaataaaagacagttgttcaaaagaagaagtacgtaaaatagtgaaggaggaaataagtaaagtggatgacagtgac cacacacaacaaaacccagagacagtgacgtcactgctcagtgagataaatgaaaggaagtcaagggaaaacaacataat aatacatggtattgaggaactagtctcagaaagagaagaggagaggaaaggttatgacaattcaaaggtaaccgagattc ttgaaacatgtaaggttccagtctgtgaaaataaattgagtcgaattgtcaggattggaaaatttgacagacaaaaacca aaacgcccaattctggtatcttttgagaaagtaaacagcaaaaagcagctatttaagaacataaggtacctacaaacgaa tgaagagatgcgaaatattagaatttcgaatgatcttactcgtagtgaaagagaacaggagatggcgctaagagacgagg caaaacgaaggaatcaactaaaaaataagatgacggaactacaagttagaattggtaatgacctaccacacatcattggt atatgtgaagtgaaaccaaaaaactgtgcaacagcatataacttagcagaatactcattagatgacattggtgactatga gatgttttcaaatatcaaatcagaagggagaggtattatattatatatacataggacccttcaagtaaaggaagtgaaaa tgacgtcacaattcagcgagaacatattcgtttctatacaattaaacaacagagacatgttgctcattggtcttatatac cggtcaccatcaaatgtgaatgaagataaggagaatgaactaaggagtctcatttgtgaagcatcggccaagggttactc acatttactgctgatgggagattttaactacccgggaatcaattggaaaaattggaataccgaaggcgaaagtatagaaa acaaggaatataaattcttggaatgtgttcaggataactttctttaccaacacatagataagcccacacgatggagagga gatgctactccacacacactggatctcattctatcaaacgaggagagtatggtaaacaatatagagttacaaagcccact tggaaaaggagatcattgtgtgatacgttttgatttcaaatgttatacacagctgagtaattatgtcaggaaagtgaagt gctataacaaggcaaactttgatgccattaatttagaaattagcagtgttgattggcagaatctcatcagtgaggaaacg ggcataaatgcgtcttggattgcgtttaaagatcaaattagtgatatagaggagaggcatgttccaactaggaaaatcaa atcggcagtgaaaaagaaacatggttttcctatagataaggaaacaatcaacaaaatacgtctaaaaaactcactttcaa ggaaagcaatacgtactaaaaaaccagaggatcggatacaatacaatagagtaagaaatcaagtaaagaaacttacaaca cgtctgaggaaaaaatacgaggatgacatagcaaaaaaatcaaaagacaatccaaagctggtttggcagtacataaattc taagactaaaacaaaggaagggatcagtgatctatacaaggatcaagctactaaaacaggtgcaaaaacagataacaaca aagataaagctaatatactaggggacttctttagtagtgtctttgtacaagaacctgagggagatgttccgaggataaga gagcgaaatatcgacatagcgatgaatgaccttgaaattgaaacaagtgaagtagagaaactcttgagtcaacttaaaag cgacaaatcacctgggatagacaaaatacacccaaggtttttgcgtgaagtggcgaaatctatagcggttccactaacac tattattcaaactctcactacagcaagaggaacttcctgatgagtggaaaaaggcaaaaattagtgcgttatataaaaaa ggggacaagggagtggcaggaaattatagaccagtcttagataactggacggaatctctagatagaggcgaatctgtgga ctgcatatacatggactatcaaaaggcatttgataccgtcccacacaataggcttatcagtaaactggaggcgtacagag tatcgaaacagatgataaattggatacgaaatttccttagtaacagaaaacagcaagtggttgtgaacggggaggaatca acatggaagccagtcacgtccggcattccgcagggatcggtgctcggacctctgatgtttgttatatttataaacgactt accggatatagtagagggggatgtgtacttgtttgcggatgatacaaaagtgtttaagaatatgcagagttcagaggata gagaattacttcaaagggatctaaatagtatgtctgtctggagtgacacatggcttttaaaatttcatccggaaaaatgt aaacatatgaacgtaggaatcaaaaaagtttcggatgtcaataattacaaattgggatatactgagcttcaacacataca tagcgagaaggacataggagtaatcatcgacaagaatcttaagtttgaagagcatattggagagaaagtgaaaaaagcta atcagatgtttgctgtcattagaaggacgttccagcacctggatgaaaaacagtttttgcctctctataaatcacttgtc cgatcgcacttggactatgcaagctctatttggtcaccacaaagcatgaaactgatagaacaaattgaaggagttcaacg acgtgcaacaaaacaactacctggtatgaaaaacctcacatatgcagaaaggctcagaaaattaaagttacctactctca gttatagacggattcgtggcgatatgatagagatatacaaaattattcatggaatttatgacaaagaagcctgtaactgt atcaaactatggaaagatgttgcaccgcgtactggtactagaggacatccattaaagatctatccgcaacaagccaaaac aacaccaaaattcatattgtatctggttgtggcgaaagaaatgaatattttgagtctgatgaagaggcgcctgatgggac ctgtatcagaaatcaactataagtaa |
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Protein
| Protein ID | pfu_aug2.0_517.1_24130.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_517.1_24130.t1 MSQIKDGGQQFSQGARRGRPPKNKSVSQTNSRNNSVNNTPDVSPNRNSNLNKQDAESDEVWSCAICSQLFDDPESKILEC ERCRQHYCISCLNKTIEEYNCLSKSDSMWFCAKCRQIVEKNIAIDIKIEERLEETIKDSCSKEEVRKIVKEEISKVDDSD HTQQNPETVTSLLSEINERKSRENNIIIHGIEELVSEREEERKGYDNSKVTEILETCKVPVCENKLSRIVRIGKFDRQKP KRPILVSFEKVNSKKQLFKNIRYLQTNEEMRNIRISNDLTRSEREQEMALRDEAKRRNQLKNKMTELQVRIGNDLPHIIG ICEVKPKNCATAYNLAEYSLDDIGDYEMFSNIKSEGRGIILYIHRTLQVKEVKMTSQFSENIFVSIQLNNRDMLLIGLIY RSPSNVNEDKENELRSLICEASAKGYSHLLLMGDFNYPGINWKNWNTEGESIENKEYKFLECVQDNFLYQHIDKPTRWRG DATPHTLDLILSNEESMVNNIELQSPLGKGDHCVIRFDFKCYTQLSNYVRKVKCYNKANFDAINLEISSVDWQNLISEET GINASWIAFKDQISDIEERHVPTRKIKSAVKKKHGFPIDKETINKIRLKNSLSRKAIRTKKPEDRIQYNRVRNQVKKLTT RLRKKYEDDIAKKSKDNPKLVWQYINSKTKTKEGISDLYKDQATKTGAKTDNNKDKANILGDFFSSVFVQEPEGDVPRIR ERNIDIAMNDLEIETSEVEKLLSQLKSDKSPGIDKIHPRFLREVAKSIAVPLTLLFKLSLQQEELPDEWKKAKISALYKK GDKGVAGNYRPVLDNWTESLDRGESVDCIYMDYQKAFDTVPHNRLISKLEAYRVSKQMINWIRNFLSNRKQQVVVNGEES TWKPVTSGIPQGSVLGPLMFVIFINDLPDIVEGDVYLFADDTKVFKNMQSSEDRELLQRDLNSMSVWSDTWLLKFHPEKC KHMNVGIKKVSDVNNYKLGYTELQHIHSEKDIGVIIDKNLKFEEHIGEKVKKANQMFAVIRRTFQHLDEKQFLPLYKSLV RSHLDYASSIWSPQSMKLIEQIEGVQRRATKQLPGMKNLTYAERLRKLKLPTLSYRRIRGDMIEIYKIIHGIYDKEACNC IKLWKDVAPRTGTRGHPLKIYPQQAKTTPKFILYLVVAKEMNILSLMKRRLMGPVSEINYK |
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