Gene
| Gene Model ID | pfu_aug2.0_517.1_24133 |
|---|---|
| Locus | scaffold517.1 : 289106 ... 290906 : - |
| To GenomeBrowser | scaffold517.1:289106..290906 |
| Genes list of scaffold | scaffold517.1 |
| Synonym | pfu_aug1.0_6926.1_31299 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_517.1_24133.t1 | 1 | 1 | XPG_N | 1 | 94 | 1.2e-08 | 35.0 | 1.1e-11 | 3.9e-08 | 33.4 |
| pfu_aug2.0_517.1_24133.t1 | 1 | 1 | XPG_I_2 | 108 | 317 | 3.1e-18 | 66.1 | 3.4e-21 | 1.2e-17 | 64.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_517.1_24133.t1 | gi|744563370|ref|XP_010977992.1| | PREDICTED: protein asteroid homolog 1 [Camelus dromedarius] | 0.0 |
| pfu_aug2.0_517.1_24133.t1 | gi|560932609|ref|XP_006192419.1| | PREDICTED: protein asteroid homolog 1 [Camelus ferus] | 0.0 |
| pfu_aug2.0_517.1_24133.t1 | gi|560965973|ref|XP_006205380.1| | PREDICTED: protein asteroid homolog 1 [Vicugna pacos] | 0.0 |
| pfu_aug2.0_517.1_24133.t1 | gi|591322687|ref|XP_007087442.1| | PREDICTED: protein asteroid homolog 1 [Panthera tigris altaica] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_517.1_24133.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_517.1_24133.t1 atgggcgttcgtggattaagaaaattcatcaagaagaaccaagggttaatgaaagatttcgaattatgtggggcgaaact agtgatagacggtaataacctattatatcatctttttgatgcaagtggaactgattacctacatggtggagattatatgc agtacgccgcacaagttcaagctttcttccaaactcttcagtcttgccatgtcagcccttttattgtttttgatggagga cacgatcctggtgatcttaagctccagaaaaggttgagcagagcaaaagataggatagctgatgttgagagattgaaaac agtacccccacttctgatttatgaagtattcaggcaggtggttgataatttcggcattccttttgttgtctgcgatcttg atgcagatcacgatgctgctgtgttggctaacgacatgagctgtcctctactttccttcgacagcgacttctttgtcttc aagctccagtatggtcttatcccattcgaaactttggatatgaatgttgtctataaaatggaagatcatactggttcatc gaaaacgtatttgaaatgcaaaatttatttctcagatgcattatcaagatttttcccgagattgggaagtgatgcagtga ttttgatggccactcttttaggaaatgatcatatcactcgagacttgctctatgatttctacagaagtttgagacttgga cccgcacgtatacctctgaaattcgaaagaaaggaaactgatttcatgaaactgttcaattggcttctagaacaggagga tctcacaacagccattgatgaagtaatacaacggacacgcaaccctgagaaaagggcagaagttagagcagccattatga cgtcaatcgatcaatacacactagaacccctgaaatgtaaatttcgtctgtcggagcatttcgatgatcacgcccagaag agggatgtgaagagttatgaaggcaatgctatcccagaatgggtaaaaagatggcatgaaacagggaaaataagtatggt tcttcagaatatcattgttcttcgccggaatattttcatgtctcagatggaggacattcggtctatgtcatcctacagat gtgctgttccaatcagaaaaatactctatggaatacttacatcaagtgactctgatcccaatagaagaatcaaagaaata gacagggacggacaaaatgtcgaagaaatgtatttggcaccagcaacaggagtcccaaagctttgtgaaattccaaatct cactatctatgaaagacagaccatgtttcttgagacacttggacttcatcccactctgcttagaaatctaccagacgatg ccaaactattgacgtcggtcatcaggtttgtctttcacaacaaacttcaatggacgaaaatcacgtccacgccatgctct gttgcctttttgctataa |
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Protein
| Protein ID | pfu_aug2.0_517.1_24133.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_517.1_24133.t1 MGVRGLRKFIKKNQGLMKDFELCGAKLVIDGNNLLYHLFDASGTDYLHGGDYMQYAAQVQAFFQTLQSCHVSPFIVFDGG HDPGDLKLQKRLSRAKDRIADVERLKTVPPLLIYEVFRQVVDNFGIPFVVCDLDADHDAAVLANDMSCPLLSFDSDFFVF KLQYGLIPFETLDMNVVYKMEDHTGSSKTYLKCKIYFSDALSRFFPRLGSDAVILMATLLGNDHITRDLLYDFYRSLRLG PARIPLKFERKETDFMKLFNWLLEQEDLTTAIDEVIQRTRNPEKRAEVRAAIMTSIDQYTLEPLKCKFRLSEHFDDHAQK RDVKSYEGNAIPEWVKRWHETGKISMVLQNIIVLRRNIFMSQMEDIRSMSSYRCAVPIRKILYGILTSSDSDPNRRIKEI DRDGQNVEEMYLAPATGVPKLCEIPNLTIYERQTMFLETLGLHPTLLRNLPDDAKLLTSVIRFVFHNKLQWTKITSTPCS VAFLL |
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