Gene
| Gene Model ID | pfu_aug2.0_5191.1_06092 |
|---|---|
| Locus | scaffold5191.1 : 16256 ... 23242 : + |
| To GenomeBrowser | scaffold5191.1:16256..23242 |
| Genes list of scaffold | scaffold5191.1 |
| Synonym | pfu_aug1.0_5781.1_16763 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_5191.1_06092.t1 | 1 | 1 | RVT_1 | 177 | 339 | 1.1e-23 | 83.6 | 4.2e-27 | 2.1e-23 | 82.8 |
| pfu_aug2.0_5191.1_06092.t1 | 1 | 1 | rve | 537 | 649 | 6.4e-24 | 84.3 | 3.5e-27 | 1.7e-23 | 82.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_5191.1_06092.t1 | gi|672207063|ref|XP_008779600.1| | PREDICTED: uncharacterized protein LOC103699348, partial [Phoenix dactylifera] | 0.0 |
| pfu_aug2.0_5191.1_06092.t1 | gi|302309734|ref|XP_002999545.1| | hypothetical protein [Candida glabrata CBS 138] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_5191.1_06092.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_5191.1_06092.t1 atgttagagccttcaaaggaactaacactcctaaatctcgcggcagccacatgtttggtcaaagtaagaggtaaaaaggc tgtcatgcgtttattgaacccgacaaattcggatattttagtgccaagtgctgtagacaaacatacagatgtatacccct tgactgatgaccatagtgcttcttttgtaggtgcagtcgacactgaaaatagtgcatcaaacacagtgctaaataatgaa cttgattttgatttacagaatgctgatttgacagaagaacagaaatgccaattacttagcgttttgcacaataaaagaga catatttgcttctaatcttggcgagcttggtaaaacgtctgtttataaacataggatagatttcaaaccaggttctaagt ctgttaggcttcccttttacaggacgtcccatcaccaagagaaggagctatctaaaccaatagatgaaatggagaagcac ggtatcattaaaccatccaactccgaaaggcactcaccagtagtgctagttcgaaagaaaaacaacacatatcgctttgc atgtgattaccgtgctcttaacaaaattactgtccctcagtcttttcctttgcctcatatagaaagtgtattcggtgcaa ttggcgcgtcgaaagctaattatttcacaaatctagatcttatgtctggattctggcagatggagttagacgaggagagc agacataaagcagcattcatcacacagcgaggagtgtacgaatggaccaggatgccattcggattgactaatgcacccat ttcatttcagactttgatggcagcagttttgaggggacttaactggaaatcagtcctagtctacatagatgacattctta ttttcagtagcacatttcaagagcaccttatgcacttagatcaagtttttaacaggttgctagaggcaaatttgaaatta cagccatccaaatgccatttcgctgtaaagcaactaaaaattttgggccatattatttcacgtaaagatcatagggcctt ggtgtggttaaaatctgctaaacacaagggtagattagagagatgggccttaaaattacaagaatataactgcaacatca agcacagaccagtcgctacggacaatgtcgtcctagaaacgaaacacacccatcaggaattaggtgaaatgcagaaatcc tgtagagatttcgaattcatataccaatacttagtcaatggcagtctaccagcagacaaggccggtatagatagagttat cggcgaaagtaggtactatagtttagtcgacggtgtactatatcactggtatgagcgacgaggtcgaaaaatacaaaaag aaatcaaacaggtaagacaattagcacttccgccggaactacgacaagatgcgctgaaatcctatcatgacggattggca gggggaggtcatctaagagtcgaaaaggtaaaatcttctcttttgcataaatacgtttggcccggtatgcacaatgacat catcaaagatgtcaaatcttgtgatccatgtcaaaggtcaaagcgggattaccatcctttccatccacctatggtacaca tgccaacttcccaaaggtttgagcgctggcatatcgacatagtcggtccattgaacaaaacaaaagactggtatgaatac attcttttatgcatagattcctgtacccgatggtcagaggcgtttccactgagaacccagagcgccaaagagacagcaca ggttttgtataaagaaatttttaccagatatggtgcccctagtgttttgttttcagacagaggccgaaattttgtgtcga atttggtgaacgcactgtgcgagctttttgaggtcacacagcaccacacgtcagcctaccacccaaacacaaacggtacg gttgaaagacaaaacagtaccttggtaaatagcctgagaacgtattgtggaaaagagcagtcaaaatggccagagttatt accaagcgttatgatggccttccgtaagtctcctaacatgcattcgacagagttctctcccttttatcttgttttttggc gaggtgatgagattaccgtttga |
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Protein
| Protein ID | pfu_aug2.0_5191.1_06092.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_5191.1_06092.t1 MLEPSKELTLLNLAAATCLVKVRGKKAVMRLLNPTNSDILVPSAVDKHTDVYPLTDDHSASFVGAVDTENSASNTVLNNE LDFDLQNADLTEEQKCQLLSVLHNKRDIFASNLGELGKTSVYKHRIDFKPGSKSVRLPFYRTSHHQEKELSKPIDEMEKH GIIKPSNSERHSPVVLVRKKNNTYRFACDYRALNKITVPQSFPLPHIESVFGAIGASKANYFTNLDLMSGFWQMELDEES RHKAAFITQRGVYEWTRMPFGLTNAPISFQTLMAAVLRGLNWKSVLVYIDDILIFSSTFQEHLMHLDQVFNRLLEANLKL QPSKCHFAVKQLKILGHIISRKDHRALVWLKSAKHKGRLERWALKLQEYNCNIKHRPVATDNVVLETKHTHQELGEMQKS CRDFEFIYQYLVNGSLPADKAGIDRVIGESRYYSLVDGVLYHWYERRGRKIQKEIKQVRQLALPPELRQDALKSYHDGLA GGGHLRVEKVKSSLLHKYVWPGMHNDIIKDVKSCDPCQRSKRDYHPFHPPMVHMPTSQRFERWHIDIVGPLNKTKDWYEY ILLCIDSCTRWSEAFPLRTQSAKETAQVLYKEIFTRYGAPSVLFSDRGRNFVSNLVNALCELFEVTQHHTSAYHPNTNGT VERQNSTLVNSLRTYCGKEQSKWPELLPSVMMAFRKSPNMHSTEFSPFYLVFWRGDEITV |
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