Gene
| Gene Model ID | pfu_aug2.0_52.1_06827 |
|---|---|
| Locus | scaffold52.1 : 142195 ... 165878 : + |
| To GenomeBrowser | scaffold52.1:142195..165878 |
| Genes list of scaffold | scaffold52.1 |
| Synonym | pfu_aug1.0_14211.1_39589 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| dynein heavy chain axonemal-like | GO:0000166 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_52.1_06827.t1 | 2 | 1 | DHC_N2 | 697 | 742 | 0.0 | 475.5 | 0.074 | 220.0 | 0.1 |
| pfu_aug2.0_52.1_06827.t1 | 2 | 2 | DHC_N2 | 759 | 1170 | 0.0 | 475.5 | 0.0 | 0.0 | 475.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_52.1_06827.t1 | gi|676474385|ref|XP_009060130.1| | hypothetical protein LOTGIDRAFT_210054 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_52.1_06827.t1 | gi|585687888|ref|XP_006820578.1| | PREDICTED: dynein heavy chain 3, axonemal-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_52.1_06827.t1 | gi|260824147|ref|XP_002607029.1| | hypothetical protein BRAFLDRAFT_127072 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_52.1_06827.t1 | gi|390355677|ref|XP_003728608.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_52.1_06827.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_52.1_06827.t1 atggccctggagcgagcaaagtatgttgaaacacctgtgcagagctgtagtaaaacacgggggttaccaggtttaccccc ccttccttctcatgttcaggatccatctgatctttatcagattgttcttaggaacagcgagcatcctcctattatgaaag gaacatcatggacattggctgctccattcaaggaagaaaaatttcaccggactccgagtgaatctattgccaataactac acaccaagtgccagtgatctcaagatcaaagagttacccaaaccagttcgcatcaaaactaaattgaatggatcaatgaa gagtccaagaatatcaagggggaaaacagcagctgataagataggaatgaatggacacatgaatgggcacaatggataca ttgatgggttagagagaaatggtacattgaatggatttgatgtgttaccagacattcaggagctacctcctagtcggccc atgacaccaaacgaacagatggatattatgttggcgatagaggaggagttcaaacaagatactggattaccaacagagag agatgaaaagagatactactactatattgaaaaaggaatcaaacagtctatgttggcccctcaacatcaagataccatgg gaaatgtacggtccttgattccaacaaatctcaatgctagtatagatttgaaatggttaaatgatgaattggaagaggaa gtacaaaaggactacgagttcagcttacggaagtcaattgttgactacattttgaaagatcagaaggaaaaagagcgatt acacattgaatggactccattgcctttcccacaaaggattattcgagctccagtgccgtggcatggcatgtacagggata tgaaggagtttaacacttgtcatctctttatcacaaacccagtcatgctagaattacagaatatctggtttgaccaattt agtcatttgaggtttgtgaaccttaaggaattgatgagtgctgaccttcctttactaccatctgaatttgagtccttggt gaagaaacaatgctgggaagctcacgaacatctcagaaaaacgtggatcccaacatgtgccaaagtttttatggagaaga aggaattatggcagcacttggtacctccaggggcagacgactctacagaacttgtggaacaattttttgccagtgtggct gccttaatgtctatccagcttcgtagcatggtggtcaactcccttcatgattttctttacttttttgaaacacacaaagc tggcaatgactttggtgacgagtttgatgaactccaatatgtacaaacacaggtcatgattataaaactacgtgtcgagg aaccaaagatagtgtttgatcctccgtttagagaaatcagggacatcatcttacgatgtttttcagaggtcattgcaagt ggagagggccttacaagagttgaatgtgagttgtttccagacatgcgagctgcttcacctaaacttctgttaagaagtgt aaagatagaggagactctagtgacagactatgtagataaggctatggaaatcttcaaacataacactgtaggaccccaga atcttaaagatgagatagctttattgaggatcacagttcctctcagcatgttctgcttggattgtaaggatctgaataca gacctttgtagccgcgctcaaagactgaaagagaggctcatcatttttgaagttgatgaaaacagagaattaaacagagg aatttgtcgtcgctatgatgaaatggcggaaagagtcagcgatgttccagatactacagaggagattgtagcattacaag aatatctgaaaacgtcttctgaagtgacagtgtacaaacttaaagacgagatagaggatgccgcaggacgcctcatgttt ttattggactatgccatcttcccatctgaagatatcaaactgaacagtacggtattccactggccagatcacattaagac cgtgtttgacttgtcatcgtcacgaatcgcaaacaggagagatcatattgaagatgaagtgaggagaaagaccgtctctt ttgaagagaagctgaatgaattaatgaaagaggttgaatctttcaagaagaaagagttcttgagtgaggacgcaatgaag aacaacacagaacagctagcatcaatcacagaaaatttggaaaaggctcgtgatgagctagaacaaatcaatgaagagga acgactgctggaatttgaacagagcttctttccaaacctacagaccatgttccagatgaaagagccatatgagaagcttt ggaatacggcataccagttccaccagaaacatgaactttggctaaatggaccattccaggatctaaatgctgaagatata gaaaatgatgtgggagaaatgtggaggactatgtacaaactgacgaagcagttcaacgatcaggctggacccaggcgtgt ggcagatactgtcaaaaacaaagtagacaaattcaagcagcatctacctattttgaacaccatctgtaatccaggtatca gggatcgccattgggaacagatgagttctatagtgggcatggatatcaaaccacaagcagagacgtcactgaacaacatg ttagagtttggtctggccaaacatctacagaggttagaggagattggtgcggcagcggccaaagaacactcactggagaa ggcactggagaagatgaaggcagactggaaggatatgtgctttgaaatggttccttacagagatactggagtgtcaattt tgactgccccagatgacatccaagtgcttctagatgatcacattgttaaagcccagaccatgagaggttcaccatttata aaaccatttgaacaggagatgaaggaatgggaagagaaacttgtctcaatgcaggatatacttgatgaatggctgaaggt ccaagctacatggctttacctggagccaatcttcagctcagaggatatcttggcacagatgccggaagagggccgtaagt ttggaatagttgatagctattggcgtgacattatgacagagtctgtaaaggacacacattgtctggtggctacagatcag aataatatgttgggaagacttagagatgccaacaacttattggaggaaatccagaaaggtcttaacgcatacttagaaaa gaaaagattgtacttcccaaggttcttctttctgtcaaatgatgagttgctagaaatcttatcagaaaccaaggatccat tgagagttcagccacacttgaagaagtgctttgagggtatcagccgcctagagtttaatgatcagcaagaaattcttggt atgatttcggctgagaatgaagtggtgccattcaactcaaagattgtacctgctaaagcaaagggtatggtggaaaaatg gctgctacaggtagaggatgtaatgatcagtagtttacgtaaagtgatcatggagtctatcgatgcctacgagcctacac cacgtaaccgctgggtgctggaatgggcaggtcaggtggttatatgttcaagctccatcttttggacgcaggaggtagag gccagcatgaaggagaaagatggtttacagaaatacttacttaaatgcaacggtcaaattgaccagattgtgcagttagt gagaggaaagttggaccctggacacagagttactctgggagccctcactgtcattgatgtacatggtaagttacaaatgt tagaaaaaaatttaatgcatcagctttcataa |
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Protein
| Protein ID | pfu_aug2.0_52.1_06827.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_52.1_06827.t1 MALERAKYVETPVQSCSKTRGLPGLPPLPSHVQDPSDLYQIVLRNSEHPPIMKGTSWTLAAPFKEEKFHRTPSESIANNY TPSASDLKIKELPKPVRIKTKLNGSMKSPRISRGKTAADKIGMNGHMNGHNGYIDGLERNGTLNGFDVLPDIQELPPSRP MTPNEQMDIMLAIEEEFKQDTGLPTERDEKRYYYYIEKGIKQSMLAPQHQDTMGNVRSLIPTNLNASIDLKWLNDELEEE VQKDYEFSLRKSIVDYILKDQKEKERLHIEWTPLPFPQRIIRAPVPWHGMYRDMKEFNTCHLFITNPVMLELQNIWFDQF SHLRFVNLKELMSADLPLLPSEFESLVKKQCWEAHEHLRKTWIPTCAKVFMEKKELWQHLVPPGADDSTELVEQFFASVA ALMSIQLRSMVVNSLHDFLYFFETHKAGNDFGDEFDELQYVQTQVMIIKLRVEEPKIVFDPPFREIRDIILRCFSEVIAS GEGLTRVECELFPDMRAASPKLLLRSVKIEETLVTDYVDKAMEIFKHNTVGPQNLKDEIALLRITVPLSMFCLDCKDLNT DLCSRAQRLKERLIIFEVDENRELNRGICRRYDEMAERVSDVPDTTEEIVALQEYLKTSSEVTVYKLKDEIEDAAGRLMF LLDYAIFPSEDIKLNSTVFHWPDHIKTVFDLSSSRIANRRDHIEDEVRRKTVSFEEKLNELMKEVESFKKKEFLSEDAMK NNTEQLASITENLEKARDELEQINEEERLLEFEQSFFPNLQTMFQMKEPYEKLWNTAYQFHQKHELWLNGPFQDLNAEDI ENDVGEMWRTMYKLTKQFNDQAGPRRVADTVKNKVDKFKQHLPILNTICNPGIRDRHWEQMSSIVGMDIKPQAETSLNNM LEFGLAKHLQRLEEIGAAAAKEHSLEKALEKMKADWKDMCFEMVPYRDTGVSILTAPDDIQVLLDDHIVKAQTMRGSPFI KPFEQEMKEWEEKLVSMQDILDEWLKVQATWLYLEPIFSSEDILAQMPEEGRKFGIVDSYWRDIMTESVKDTHCLVATDQ NNMLGRLRDANNLLEEIQKGLNAYLEKKRLYFPRFFFLSNDELLEILSETKDPLRVQPHLKKCFEGISRLEFNDQQEILG MISAENEVVPFNSKIVPAKAKGMVEKWLLQVEDVMISSLRKVIMESIDAYEPTPRNRWVLEWAGQVVICSSSIFWTQEVE ASMKEKDGLQKYLLKCNGQIDQIVQLVRGKLDPGHRVTLGALTVIDVHGKLQMLEKNLMHQLS |
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