Gene
| Gene Model ID | pfu_aug2.0_52.1_06831 |
|---|---|
| Locus | scaffold52.1 : 303585 ... 377048 : - |
| To GenomeBrowser | scaffold52.1:303585..377048 |
| Genes list of scaffold | scaffold52.1 |
| Synonym | pfu_aug1.0_1632.1_66045 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_52.1_06831.t1 | 1 | 1 | FERM_N | 523 | 609 | 1.6e-15 | 56.9 | 2.0e-18 | 4.3e-15 | 55.5 |
| pfu_aug2.0_52.1_06831.t1 | 2 | 1 | FERM_M | 614 | 726 | 3.8e-20 | 72.3 | 1.8e-23 | 3.8e-20 | 72.3 |
| pfu_aug2.0_52.1_06831.t1 | 1 | 1 | FERM_C | 737 | 825 | 6.2e-11 | 42.3 | 8.8e-14 | 1.9e-10 | 40.8 |
| pfu_aug2.0_52.1_06831.t1 | 4 | 1 | PDZ | 971 | 1049 | 0.0 | 179.6 | 2.0e-22 | 4.2e-19 | 68.4 |
| pfu_aug2.0_52.1_06831.t1 | 4 | 1 | PDZ_2 | 980 | 1061 | 1.3e-20 | 73.0 | 1.4e-09 | 2.9e-06 | 27.0 |
| pfu_aug2.0_52.1_06831.t1 | 4 | 2 | PDZ | 1190 | 1263 | 0.0 | 179.6 | 1.5e-19 | 3.2e-16 | 59.2 |
| pfu_aug2.0_52.1_06831.t1 | 4 | 2 | PDZ_2 | 1207 | 1249 | 1.3e-20 | 73.0 | 4.1e-06 | 0.0087 | 15.9 |
| pfu_aug2.0_52.1_06831.t1 | 4 | 3 | PDZ | 1372 | 1437 | 0.0 | 179.6 | 8.1e-12 | 1.7e-08 | 34.5 |
| pfu_aug2.0_52.1_06831.t1 | 4 | 3 | PDZ_2 | 1387 | 1436 | 1.3e-20 | 73.0 | 7.0e-09 | 1.5e-05 | 24.8 |
| pfu_aug2.0_52.1_06831.t1 | 2 | 2 | FERM_M | 1643 | 1680 | 3.8e-20 | 72.3 | 4.3 | 9200.0 | -3.3 |
| pfu_aug2.0_52.1_06831.t1 | 4 | 4 | PDZ | 1738 | 1787 | 0.0 | 179.6 | 1.2e-07 | 0.00026 | 21.0 |
| pfu_aug2.0_52.1_06831.t1 | 4 | 4 | PDZ_2 | 1748 | 1788 | 1.3e-20 | 73.0 | 0.012 | 25.0 | 4.8 |
| pfu_aug2.0_52.1_06831.t1 | 1 | 1 | Y_phosphatase | 2065 | 2293 | 0.0 | 234.1 | 0.0 | 0.0 | 233.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_52.1_06831.t1 | gi|524887945|ref|XP_005100554.1| | PREDICTED: tyrosine-protein phosphatase non-receptor type 13-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_52.1_06831.t1 | gi|675428369|ref|XP_008928102.1| | PREDICTED: FERM and PDZ domain-containing protein 2 [Manacus vitellinus] | 0.0 |
| pfu_aug2.0_52.1_06831.t1 | gi|696961576|ref|XP_009569073.1| | PREDICTED: LOW QUALITY PROTEIN: FERM and PDZ domain-containing protein 2 [Cuculus canorus] | 0.0 |
| pfu_aug2.0_52.1_06831.t1 | gi|699649539|ref|XP_009896074.1| | PREDICTED: LOW QUALITY PROTEIN: FERM and PDZ domain-containing protein 2 [Picoides pubescens] | 0.0 |
| pfu_aug2.0_52.1_06831.t1 | gi|543713524|ref|XP_005498064.1| | PREDICTED: LOW QUALITY PROTEIN: FERM and PDZ domain-containing protein 2 [Columba livia] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_52.1_06831.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_52.1_06831.t1 atgcctgggacagttattacagtatctctatgtgagatattagagttcagtggacagccactccgggagattgaaatatg gtccattttgtatcagagtgcgctgtatttacagcagctactcagaaaagatggagtgcttacagctgacataagccatt ttctggtaacaccagagactttgtgctttcatgcagatggtggagttgaaatctgtggtgctttggcaacaccaagttca agcaatagattcatagcaccagaactatctggattccaagaaataaatactgatgtggttgaaaagaaaactgacttgga aggtgatttgcagcatgtattaaggcacatgaccaacaacaacttcatagctagaatgacatgtgagcagttgttacaga cgtgtacaacgttagccgagaagtacccgtgtaatctccgattcagctcctacacacaggagttttacagtatggtgatg ggaaatggaagttctagtgaggatgaaaacaagacatcgagtattattgctagagactttgacactgcatcccatcagag ggaaagagaagccaagagatcaaggcgtaaacatagacgtgaaggagatagcgacaggtccagatctaggtcaaggtctc gatcgagatctgcatcggagggagtaggaggccattacattcattgctcttctttttcttgtaaaatttcagatttcagt tcaaaggagaatgcctatggtctccctgatgacaaattgccaccatacacccagtacatgcagaagatgtcagagataac agacacaggactctcatactatttgtctgatataaccaaccaccctgcaaaccaaaactatggtagtctacccaggcaga tgacccatagttacagtggcctatccaggcaggttgaccctagttacagtagcctatccaggtatagggataataacttt ggtagtcttcccaggagtttggaccaaagttttgacagtcttactaggcagagggaaagttctcaacaatacaatcttaa ctttgaaacagggtcgtacatgggtcaaacagcttatgagaagtatgtgcgattgaaggaaaggcaaagaaaattgaaaa tcctacggcatgagctactcggagatcagatgatcaatcgtcatgaattagctgatcatgccagagcagataccagatct ttggtatccctaccaggttattcacaaggtttttacatgcctggactacatatgaggtatggatctgagacagcccttaa actaagactggagtcagacttagaaagcctggcaagtagtgagatgtctatggatcgttactcgaaaagggctggagatg ttattcatacaccatcatcacagccacatgtccctttgtctgagaggctgaaaaaggccaagaatctcatctcaaatagt aataatccaaccaaggagtattatggaccagaatttgtccacaagtccatgaagcccattgtgagagttcctgtaccttt acaaggagagagtttgaagaatccctcacttgcccgcagagtagtggttgttttactgactggccaaaagttagaggcct ttgttgaccccagtactactggacatcagatgtttgaaagtattatcactcatgtagagcttcctgaattcttcttcttt gggctgtcatatatcagtcatggagaacatttctttttggagcccgacctgaagctacataagatatcacctgaaggttg gagagatggtactaaaagtggagtggcggtgaccttcactctgtatctcagggtcaaattctacccagaggatctgtctc ttgtaaggcaccaagtgaccattcatcagttatatttacaactacgtcaggacatcgtagacgaacgtttatggtgtcat gaagaaagatgtgtagcattagcaggattagcactacaagcagagtatggcaattatgacagtgaaatgatgggggaata ttacttccaaacagaccactactttcccacaaatctgattaacgatttcggagctgaaaacttatacacaaaggcaatgg ggagccatattcaggcatctcagatgactgagagacatgcccagctagattttgtcaagatggcaattaatctacctgat tatggcatacattactacaagttattgaagagtaaacaggacactagtagtgctgtgtggttgggaatcaagttgaagtg catggttatagcagagagtcacaccctacacagagttattactcagcagtacccgtggcaagcggtacaaaaagtctcct tcaacaaacgtcggttcagtatctctgtaaaaccagaacttgctgccggccaaccaaagaaaatgaactacttcacaaac agcttcagaaagggaagctatctactacagtttttaactgctcaacacagatttcagctgagtatgagagcacgagaaac tcagctaggaatggaaggggagcagtttgacaacttttcggaggcagaggaaaattgcccagcagaggtagaaaaatctt tgacttcttacactacgtataactcatttcagagagagtcagaagatgatcaagtgcttcctcagtataggcaaccgcct ccttatactaccccatctatcagcatgtcagatctacgtgagaagtatgcactacaaactagctccctgagaaacggaca tgtaacaaacgcatgtaccacaggtgatcaacccaatgatgtagcagtacacaactcagatatagtagatgaattaggag aaccagctgtcttactgaaagaacacttccttactgataaaacagaaaaagatttatcagcagacagatttgacattctt tcttcagaacatagtggcagctgtacatttcaagtagttctggagaaagagagagatgggggaatcggtattacaatcgt cggtggggattctgattatggaatatttataaaggatgtacgacctcacggccctgccgacgtagaggggacgctaagga agggagataagatacttgccattgacaatgtcagtatgaacaaaatggatcatgcggcagcagtccaaatgatccaaaat tcaccacatcaagtgaaactgttagtgtcccgtgttaacttagctagttctagcaaccagactttagacgtagctgattt ccccagagatctcgacgaatctgatgctgataacgatcatgtacatactcatggttatgtatatactcaatcattacaaa gtcatggacagaataatgttgttaaagaagaatttacaaaaaccaaaaacattccagaacagcatgctgcgtattaccag tctgaacagtcagttgatcatgttagagctattccgtacatgagagaaatgacagaatcaacaatcaatgcagaaaaaga cttcagcaatattacaaggaagagtaccagtcctaaagatagtgagaccagtgaaatcacaagttgtaacgacgaaaaac agtcagtaacgtccagtagccccaaaggtgacgaaaggcctctttatgaagttactctacaaaagaaggatggaactttt ggactgaatatagcaggaggtgtgaatacatcagtcagacaaggtggtatatacgtcaagtcattacagagaggtggtgc tgccgaactagatggtactatacaaataggagatcgaatactaaagataaatggtcatctgttaaatcaatgtacccaca aacaagctgttgaggctataagaggggcaccggcatcatgttgttttatcatggagagatgccccactagatccagagaa agttccaccggcacaagtcctcaacaagagttcaacagtggagaaatttccccacagcctctcacacagcaacacaaagt aaccgagggcaacgtacatgtagaaaaatcagcaggtgtctcacaagaaatgaggcattcttatccaggcacgccaccta taggcagacaaggtcatgatttaagtgacgctgttttaggggaagaagacatggaaaacaatgacggcaaaatatactac ccatttgtgaacaaagagaatacttacagtgtagacataaggaaaggcagtagtggtttgggattcagcgtgtacggggg agtggacgtggacactgaagagcccacacagggtatcgtacgtattaaacaagtattccccatcggtcctgcagcatcca gtggtcaaattgaacgagatgatgtcatattagaagtcaatggtaaacctgtcaaaggactgacacatgcttatcatttt ggtgctgatcctgttgatgaccttattgatgttaatccggattctgtttttgtgaatgaaatagatggaaatcagcagca gttgggtgaaaccagtgaaatccagagtaaagctgaagtagaaaggaaggcagaatctcaggaagtaagtcaagagcttt ccttatcagataagtatgaagaaaaagcagatggagaaattcagtatgcacaggaattagaccatgatataagtttgccc aatgaaaatgttagtcttatcattagtcatggagataactctcaatatacagctaagacaaataaacctcttgaacaggc ggcaagttgtgaaaattatgaggatatcggaaatgaaactgatgtgacaaattcagagtgggattataatagcatgaaag atcttcttgttcagggacaaaatgacatacaaagtgacaagaaaggcattgaaagtgaaagtagatatgtagactctgag gatgacaagaaagacattgaaagtgaaagtagatatgtagactctgaggatgatcagacagattctgaatgtgataatga aagtaggagagacaaagatgatctgatagatttacaaagccatgaacactgtgattataaagataccagaagtgaaagta gatattcggacaccgaaaatgaacatcttgaacttgagaatgaacagaacatgagtgaacaagacaaaatagtaaaccaa cagagccaagttctatatgacagtcaaggccacaggagtgatggtgatcacacggattctgatgaaacaaattctgtaaa cagagattttgatgaggaatgcgtaaaggacgaggttataattaggaagacagaacctaacgatgctgaactctttaata aagtctttacaattgaactgaagaagttcaagactcatggattaggatttagcttagttacggcagagaaggataaccaa acaggagtttttgttcgttccattgcagagaatggcgaggcagatagagacgggagactgcgtgtgatggacagagtatt aaagaatgaaatgtatctacatgtatattgttcttttgtaactccatttatttgcagaatgtcatcaagaaatcttgatg tgataactccacctgtcataatgacagattcagaagatgacagttatgatgtagatcattcatctgtctcaggtgatgat tattatgatgaggaggaggaggaggagcatttttatggtgacagaatatcatttggtgaaagagacttgggtcctgagga gaacaaaaatgaagatatagatgaagaaggagatgaagatgttaatgaaagcatcattgactctgaagaagaagaaaata taaatgcatttgtgagagaagcagagaaacttctagcttcttcacagccctctgattttcactcggatagctttatagag ggtggtgggtctggaaacacaacatttattgaggcaggaaattggagtcacaactttgaagtagcatatacagaggatag agagactgaggaaaatgacgcttggtcattcactgatgaatatgatagagataggcatgctgtggagataccacaggagg aacttgggagagatcagatgtcaatgaagaaccagacatttactattgtcccatcacaaaggaccctgaatatagacata ccagtgatgttaaacactgaatggctggaggccttaccttttttgttaccaggagaggaaatgatgtcagagttaccagg gttactgagcagactacaacaacagacacagagagatgaccctgcagaggagtataaggagctgcggaacataaaaagca cagatgaatgtagcattgcgaaaaggcctgaaaacaagccttgtaacaggtttagaaatgtcttaccatatgatgttaac agagtagagctaggaagaaatgctgattacattaatgctagtcatatcttgatgaatgttggtgggtgtgaggctcactt catcgctactcagggtcctaagcttgagacagcagaggatttctggcagatgatatgggagcaaaaggtatctgtgatag ccatgctgacactggacgtagaaagtcagaaggtcaaatgtcatcgttactggcctgacttccaggaaatacctatctat gtctgtgatgaaactttacgtataaagttgatctccgtggaatctgtaacggacatggatgtaagaaagatttcattaga ggatgtcaccaacaatgaatgtaggattgtgtatcatgtcaacttcacaacttggccagaccagggagtaccaaagccta ttactgttttacagtgtatacagttagtgcatgtgtaccacagtacaggacctgtattagtgcattgtagtgcagggata gggaggacaggtacatttatcactatagatctcgccctcgctcaaatagagacaaatggaaagtgtgatatttttgagat tgtccaggagttaagaaaacagcgctatggaatgattcagactaaggatcagtatacattatgttacttggcttgcattg aagctatcgagagagctttgtcatatccatctatatctggaaaagaaacagaggaagcttga |
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Protein
| Protein ID | pfu_aug2.0_52.1_06831.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_52.1_06831.t1 MPGTVITVSLCEILEFSGQPLREIEIWSILYQSALYLQQLLRKDGVLTADISHFLVTPETLCFHADGGVEICGALATPSS SNRFIAPELSGFQEINTDVVEKKTDLEGDLQHVLRHMTNNNFIARMTCEQLLQTCTTLAEKYPCNLRFSSYTQEFYSMVM GNGSSSEDENKTSSIIARDFDTASHQREREAKRSRRKHRREGDSDRSRSRSRSRSRSASEGVGGHYIHCSSFSCKISDFS SKENAYGLPDDKLPPYTQYMQKMSEITDTGLSYYLSDITNHPANQNYGSLPRQMTHSYSGLSRQVDPSYSSLSRYRDNNF GSLPRSLDQSFDSLTRQRESSQQYNLNFETGSYMGQTAYEKYVRLKERQRKLKILRHELLGDQMINRHELADHARADTRS LVSLPGYSQGFYMPGLHMRYGSETALKLRLESDLESLASSEMSMDRYSKRAGDVIHTPSSQPHVPLSERLKKAKNLISNS NNPTKEYYGPEFVHKSMKPIVRVPVPLQGESLKNPSLARRVVVVLLTGQKLEAFVDPSTTGHQMFESIITHVELPEFFFF GLSYISHGEHFFLEPDLKLHKISPEGWRDGTKSGVAVTFTLYLRVKFYPEDLSLVRHQVTIHQLYLQLRQDIVDERLWCH EERCVALAGLALQAEYGNYDSEMMGEYYFQTDHYFPTNLINDFGAENLYTKAMGSHIQASQMTERHAQLDFVKMAINLPD YGIHYYKLLKSKQDTSSAVWLGIKLKCMVIAESHTLHRVITQQYPWQAVQKVSFNKRRFSISVKPELAAGQPKKMNYFTN SFRKGSYLLQFLTAQHRFQLSMRARETQLGMEGEQFDNFSEAEENCPAEVEKSLTSYTTYNSFQRESEDDQVLPQYRQPP PYTTPSISMSDLREKYALQTSSLRNGHVTNACTTGDQPNDVAVHNSDIVDELGEPAVLLKEHFLTDKTEKDLSADRFDIL SSEHSGSCTFQVVLEKERDGGIGITIVGGDSDYGIFIKDVRPHGPADVEGTLRKGDKILAIDNVSMNKMDHAAAVQMIQN SPHQVKLLVSRVNLASSSNQTLDVADFPRDLDESDADNDHVHTHGYVYTQSLQSHGQNNVVKEEFTKTKNIPEQHAAYYQ SEQSVDHVRAIPYMREMTESTINAEKDFSNITRKSTSPKDSETSEITSCNDEKQSVTSSSPKGDERPLYEVTLQKKDGTF GLNIAGGVNTSVRQGGIYVKSLQRGGAAELDGTIQIGDRILKINGHLLNQCTHKQAVEAIRGAPASCCFIMERCPTRSRE SSTGTSPQQEFNSGEISPQPLTQQHKVTEGNVHVEKSAGVSQEMRHSYPGTPPIGRQGHDLSDAVLGEEDMENNDGKIYY PFVNKENTYSVDIRKGSSGLGFSVYGGVDVDTEEPTQGIVRIKQVFPIGPAASSGQIERDDVILEVNGKPVKGLTHAYHF GADPVDDLIDVNPDSVFVNEIDGNQQQLGETSEIQSKAEVERKAESQEVSQELSLSDKYEEKADGEIQYAQELDHDISLP NENVSLIISHGDNSQYTAKTNKPLEQAASCENYEDIGNETDVTNSEWDYNSMKDLLVQGQNDIQSDKKGIESESRYVDSE DDKKDIESESRYVDSEDDQTDSECDNESRRDKDDLIDLQSHEHCDYKDTRSESRYSDTENEHLELENEQNMSEQDKIVNQ QSQVLYDSQGHRSDGDHTDSDETNSVNRDFDEECVKDEVIIRKTEPNDAELFNKVFTIELKKFKTHGLGFSLVTAEKDNQ TGVFVRSIAENGEADRDGRLRVMDRVLKNEMYLHVYCSFVTPFICRMSSRNLDVITPPVIMTDSEDDSYDVDHSSVSGDD YYDEEEEEEHFYGDRISFGERDLGPEENKNEDIDEEGDEDVNESIIDSEEEENINAFVREAEKLLASSQPSDFHSDSFIE GGGSGNTTFIEAGNWSHNFEVAYTEDRETEENDAWSFTDEYDRDRHAVEIPQEELGRDQMSMKNQTFTIVPSQRTLNIDI PVMLNTEWLEALPFLLPGEEMMSELPGLLSRLQQQTQRDDPAEEYKELRNIKSTDECSIAKRPENKPCNRFRNVLPYDVN RVELGRNADYINASHILMNVGGCEAHFIATQGPKLETAEDFWQMIWEQKVSVIAMLTLDVESQKVKCHRYWPDFQEIPIY VCDETLRIKLISVESVTDMDVRKISLEDVTNNECRIVYHVNFTTWPDQGVPKPITVLQCIQLVHVYHSTGPVLVHCSAGI GRTGTFITIDLALAQIETNGKCDIFEIVQELRKQRYGMIQTKDQYTLCYLACIEAIERALSYPSISGKETEEA |
|