Gene
| Gene Model ID | pfu_aug2.0_52.1_06838 |
|---|---|
| Locus | scaffold52.1 : 592236 ... 601646 : - |
| To GenomeBrowser | scaffold52.1:592236..601646 |
| Genes list of scaffold | scaffold52.1 |
| Synonym | pfu_aug1.0_728.1_58225 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| low quality protein: cadherin-23 | GO:0006810 GO:0007155 GO:0016020 GO:0030030 GO:0035315 GO:0044464 GO:0050896 GO:0050954 GO:0060119 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_52.1_06838.t1 | gi|676428893|ref|XP_009045423.1| | hypothetical protein LOTGIDRAFT_230236 [Lottia gigantea] | 4.0e-36 |
| pfu_aug2.0_52.1_06838.t1 | gi|542199950|ref|XP_005474224.1| | PREDICTED: cadherin-23-like [Oreochromis niloticus] | 4.0e-31 |
Transcript
| Transcript ID | pfu_aug2.0_52.1_06838.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_52.1_06838.t1 gaggatgtaacagatccagatattggaaataattctgtccacagttatgtcctttcgtccttcacctctgaccctgatac tctgctcagttcagtgggagctgaaccgttcaagcttttccctaatggaaccattaaaaccaacacatacttcaagtctg atatctatggatactttataatgattgtaaaggtcaaggacactcatggcaactctgatactgcagaggtcaagatatca ttgataaatgatgaccagagagtcaaggttatattccgaatgacaccagaacaagtcaggaatttttcaacagaatttaa aactcgacttgaaagaattactggatacaaaattgttgttgataaaatccagacccatgaaaatgatcaaggaaaaccag aagtagacaagacagacatgtttatacacggtgaaagagagaatccctttgccattgttgatgcagcagaactactaagt aaaattgattccaaagccacagaacttataccagtccttaatgattacaatatccttcaaattgtgcctacaacaagtca ggctttggaggaggactcatcacgtacactcattatggctatcatattattagctattcttttgggcataccctgtatcg tcatgataattgtcatatttcttatacgacaaaaatatcagaggaaacttaaagctgccacagcaatggcatatggtcaa gactcagatttacaaaagctacagttgccggggaccaatatacatgcatatgagaagtaa |
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Protein
| Protein ID | pfu_aug2.0_52.1_06838.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_52.1_06838.t1 EDVTDPDIGNNSVHSYVLSSFTSDPDTLLSSVGAEPFKLFPNGTIKTNTYFKSDIYGYFIMIVKVKDTHGNSDTAEVKIS LINDDQRVKVIFRMTPEQVRNFSTEFKTRLERITGYKIVVDKIQTHENDQGKPEVDKTDMFIHGERENPFAIVDAAELLS KIDSKATELIPVLNDYNILQIVPTTSQALEEDSSRTLIMAIILLAILLGIPCIVMIIVIFLIRQKYQRKLKAATAMAYGQ DSDLQKLQLPGTNIHAYEK |
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