Gene
| Gene Model ID | pfu_aug2.0_524.1_14251 |
|---|---|
| Locus | scaffold524.1 : 11566 ... 17435 : - |
| To GenomeBrowser | scaffold524.1:11566..17435 |
| Genes list of scaffold | scaffold524.1 |
| Synonym | pfu_aug1.0_11539.1_03097 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_524.1_14251.t1 | 2 | 1 | HECT | 332 | 355 | 2.0e-07 | 30.4 | 0.083 | 1200.0 | -1.7 |
| pfu_aug2.0_524.1_14251.t1 | 2 | 2 | HECT | 447 | 511 | 2.0e-07 | 30.4 | 2.8e-11 | 4.1e-07 | 29.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_524.1_14251.t1 | gi|688613817|ref|XP_009295594.1| | PREDICTED: G2/M phase-specific E3 ubiquitin-protein ligase-like isoform X1 [Danio rerio] | 3.0e-14 |
| pfu_aug2.0_524.1_14251.t1 | gi|688613528|ref|XP_005162589.2| | PREDICTED: G2/M phase-specific E3 ubiquitin-protein ligase-like [Danio rerio] | 1.0e-12 |
Transcript
| Transcript ID | pfu_aug2.0_524.1_14251.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_524.1_14251.t1 atgaattcctacgattatttcgagacgtcacagaagttgacagaacaggccgaaaagctgctggccatggccaaattctt tcaagcaatgggggagaaaatgtatcgggaaaattatccctatccatccggtagagaagattgggacgaggagattaggg cagaggaaaagaagaaagaagtaaagaagagaaggtgtaactaccgcatgtttgaaccgagcagtaccaccaccagtaca atcgtcgagccaccaacttcaccagcaatgatcatagacgaggaggattgggagcgggaaataagtatatgcccggagcc tattttcaaggtgcctacagtaccagccaaaatcaaggtacttgcatctttcatcgaaacaaccttaaaaatgtcaaaag gggaatttcatctgaaagtatgcgacggaggaagggacgttatggcagacgacagattacaggacttgtcaggaacaatt acatcagaaagggttcatattgatgtaattcaaaatcgcacgagagcagatgaagaggaaggggaatgtaacagattgga ggaattagaaaaagcaataccagccaatttctgcgatcaaagtgcagacagaactgcagatattatagctgaagcgactt tagagataatggcagatgtctcagaacctgtatctattctaaaagaatacagggaacagtttctacagggaagacctcta gatgtggtatctatggcggaggctatagagggagatacttctgcaatttttataagcagaaataatctgtttgaagacgc catggaagaacttaaaaatttaggaaacatccgctgtcctctagaagtgtccttttatggcgaggaggcaatggacttgg gggggccaagaaaggagttcttggcctccttaatgcaggaaatccaggatcgctttctagttactcatcaaggggatgtc atcctgcaaataaatgaagatgcaattggaaagcaccattttttttatgctggcatggccgtcgggataggaattttgca aggtgcggatataccagaacacctcctgcatgtgacaacacaaccgcaacaggaacatgttcgccagttccgttctggcc tccgcaggacaggcgtactccagttacttgaatccaaaccaaacatccggcatttgttcacccagaggaaatctataaat gtgacgtccctgctacatacgttccacacaattttctcggaagagggttccaataaaaggcacaaggaagaagaggcata tcgcttctttgtcaaatacgtcagagacgtatacagtggtagaagaggaaatgtaacagtagaaagaattcttaagtttg cgactggaagcgcaagtttccccgttttaggttatgggattgcgccaactattgagtttgttgacaccaggtatccgaca tcatcaacatgcataaacaagatgtatcttccaaatgaagaaatgattgcagaaaattacgacatggcttttatgaatga ctacttcggtttagagtga |
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Protein
| Protein ID | pfu_aug2.0_524.1_14251.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_524.1_14251.t1 MNSYDYFETSQKLTEQAEKLLAMAKFFQAMGEKMYRENYPYPSGREDWDEEIRAEEKKKEVKKRRCNYRMFEPSSTTTST IVEPPTSPAMIIDEEDWEREISICPEPIFKVPTVPAKIKVLASFIETTLKMSKGEFHLKVCDGGRDVMADDRLQDLSGTI TSERVHIDVIQNRTRADEEEGECNRLEELEKAIPANFCDQSADRTADIIAEATLEIMADVSEPVSILKEYREQFLQGRPL DVVSMAEAIEGDTSAIFISRNNLFEDAMEELKNLGNIRCPLEVSFYGEEAMDLGGPRKEFLASLMQEIQDRFLVTHQGDV ILQINEDAIGKHHFFYAGMAVGIGILQGADIPEHLLHVTTQPQQEHVRQFRSGLRRTGVLQLLESKPNIRHLFTQRKSIN VTSLLHTFHTIFSEEGSNKRHKEEEAYRFFVKYVRDVYSGRRGNVTVERILKFATGSASFPVLGYGIAPTIEFVDTRYPT SSTCINKMYLPNEEMIAENYDMAFMNDYFGLE |
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