Gene
| Gene Model ID | pfu_aug2.0_524.1_14258 |
|---|---|
| Locus | scaffold524.1 : 93958 ... 116032 : + |
| To GenomeBrowser | scaffold524.1:93958..116032 |
| Genes list of scaffold | scaffold524.1 |
| Synonym | pfu_aug1.0_17.1_14694 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_524.1_14258.t1 | 1 | 1 | Rad60-SLD | 10 | 79 | 7.1e-07 | 28.8 | 1.1e-09 | 1.3e-06 | 27.9 |
| pfu_aug2.0_524.1_14258.t1 | 1 | 1 | ubiquitin | 15 | 80 | 3.7e-17 | 61.4 | 5.3e-20 | 6.6e-17 | 60.6 |
| pfu_aug2.0_524.1_14258.t1 | 3 | 1 | UBA | 148 | 157 | 6.3e-06 | 25.8 | 6.6 | 8100.0 | -3.2 |
| pfu_aug2.0_524.1_14258.t1 | 2 | 1 | Sporozoite_P67 | 172 | 317 | 9.8e-08 | 30.3 | 2.6e-05 | 0.032 | 12.1 |
| pfu_aug2.0_524.1_14258.t1 | 3 | 2 | UBA | 210 | 218 | 6.3e-06 | 25.8 | 8.2 | 10000.0 | -3.5 |
| pfu_aug2.0_524.1_14258.t1 | 2 | 2 | Sporozoite_P67 | 440 | 505 | 9.8e-08 | 30.3 | 5.4e-05 | 0.067 | 11.0 |
| pfu_aug2.0_524.1_14258.t1 | 3 | 3 | UBA | 518 | 554 | 6.3e-06 | 25.8 | 5.1e-09 | 6.3e-06 | 25.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_524.1_14258.t1 | gi|676482327|ref|XP_009062662.1| | hypothetical protein LOTGIDRAFT_128630 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_524.1_14258.t1 | gi|524883873|ref|XP_005098562.1| | PREDICTED: ubiquilin-1-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_524.1_14258.t1 | gi|410910822|ref|XP_003968889.1| | 0.0 | |
| pfu_aug2.0_524.1_14258.t1 | gi|241999522|ref|XP_002434404.1| | ubiquilin 1,2, putative [Ixodes scapularis] | 0.0 |
| pfu_aug2.0_524.1_14258.t1 | gi|742109484|ref|XP_010871866.1| | PREDICTED: ubiquilin-4-like [Esox lucius] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_524.1_14258.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_524.1_14258.t1 atggctgacgaagaaagtccgaagacgatcaaaataactgttaaaaccccaaaagacaagcatgaaattgaaattgatag taatgctggcgtaaaagagttcaaagatgaagttgctaagaagtttgcagcacctattgaacagttgtgtctgatatttg ccggcaaaattttgaaggacggtgatactttacaacagcatgggattaaagatggcatggttgttcatcttgttataaaa tctgccaataggaatccagcacctgctgctccgtcacagtccagctcatcaactagtcagggatcaggtggagcgccaga tgttagtcaaactccttttgggttgggccccctgggaggtctagctggaatggggaacctgggtatgggctcggctaact ttatggaaatgcagcagagaatgcaaagagaggtgatgaacaatcctgaaatgttacgtcagatgatggataatccattc gtacaacaactgatgtcaaatccagatgtcatgagacagatgattaccagtaatccacagatgagagaacttatggagag aaatcctgaaatatcacacatgctaaacaacccagagctaatgagacagacaatggaacttgccaggaatccagccatgt tacaggagttaatgagatcgcaggacagagctatgagtaatttagagagtataccaggagggttcaatgccctacagaga atgtatagagatgtacaagaacccatgatggatgctgctttaggaaaccagaatccgtttgcctcacttgttggtcaaga gagtaatgatagtcagcgagggagagaaaacacagatccccttcccaacccctgggccccatcctcatcacaggggcagt ccacctcatcctctacaagtacaactaacactactagtacatcctcacccagcagtggtggcttaccagggctaggtgga gggatgttcaattctcctggcatgcagagtttgatgcaacaaatgttacagaatccacaaaccatggagaacatgttaca ggctccatacatgcaggctatgctacaaaatatgtcatctaacccagaaatggctaatcagatattaagttccaacccga tgtttgccggtaatccacaactattacaacaagttcaatcacagatgccatccatgttagaacagatgcagaatccacag atgcagcagttatttaccaaccctgaggctctgaatgccataatgcagatacagcagggcatgagtacattacagagaca ggcccctacactatttcctggtttaaatcctggtgctcctggtactacatctgcagtttctacaaccagccagtctagtt caacttctactactagcactacaactgcaagtactacagagacgaccacagctacagggacgacgcccaccaccagcacc cccacaaacacctccacatcaccacagaacccggaccaactctctaacctcatgtcacatatgatgcagatgatggctgc aggaaacattaatcagcccccagaacaaagatatgcacaacaactagatcatttagctagtatgggatttatggacagag aagcaaacatacgagcattacaagcaacaatgggagacgttaatttggcaatagacaggttattacaacagcgatga |
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Protein
| Protein ID | pfu_aug2.0_524.1_14258.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_524.1_14258.t1 MADEESPKTIKITVKTPKDKHEIEIDSNAGVKEFKDEVAKKFAAPIEQLCLIFAGKILKDGDTLQQHGIKDGMVVHLVIK SANRNPAPAAPSQSSSSTSQGSGGAPDVSQTPFGLGPLGGLAGMGNLGMGSANFMEMQQRMQREVMNNPEMLRQMMDNPF VQQLMSNPDVMRQMITSNPQMRELMERNPEISHMLNNPELMRQTMELARNPAMLQELMRSQDRAMSNLESIPGGFNALQR MYRDVQEPMMDAALGNQNPFASLVGQESNDSQRGRENTDPLPNPWAPSSSQGQSTSSSTSTTNTTSTSSPSSGGLPGLGG GMFNSPGMQSLMQQMLQNPQTMENMLQAPYMQAMLQNMSSNPEMANQILSSNPMFAGNPQLLQQVQSQMPSMLEQMQNPQ MQQLFTNPEALNAIMQIQQGMSTLQRQAPTLFPGLNPGAPGTTSAVSTTSQSSSTSTTSTTTASTTETTTATGTTPTTST PTNTSTSPQNPDQLSNLMSHMMQMMAAGNINQPPEQRYAQQLDHLASMGFMDREANIRALQATMGDVNLAIDRLLQQR |
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