Gene
| Gene Model ID | pfu_aug2.0_524.1_14262 |
|---|---|
| Locus | scaffold524.1 : 186598 ... 207696 : + |
| To GenomeBrowser | scaffold524.1:186598..207696 |
| Genes list of scaffold | scaffold524.1 |
| Synonym | pfu_aug1.0_7683.1_09615 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| glycogen | GO:0003777 GO:0004373 GO:0005524 GO:0005978 GO:0007018 GO:0016887 GO:0030286 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_524.1_14262.t1 | 1 | 1 | Glycogen_syn | 40 | 612 | 0.0 | 1089.9 | 0.0 | 0.0 | 1089.6 |
| pfu_aug2.0_524.1_14262.t1 | 2 | 1 | Glyco_transf_5 | 41 | 269 | 2.1e-09 | 37.2 | 3.1e-12 | 1.5e-08 | 34.4 |
| pfu_aug2.0_524.1_14262.t1 | 2 | 1 | Glycos_transf_1 | 331 | 407 | 1.1e-06 | 28.2 | 0.0028 | 14.0 | 5.0 |
| pfu_aug2.0_524.1_14262.t1 | 2 | 2 | Glyco_transf_5 | 467 | 503 | 2.1e-09 | 37.2 | 0.16 | 770.0 | -0.7 |
| pfu_aug2.0_524.1_14262.t1 | 2 | 2 | Glycos_transf_1 | 502 | 551 | 1.1e-06 | 28.2 | 4.2e-08 | 0.00021 | 20.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_524.1_14262.t1 | gi|676466647|ref|XP_009057632.1| | hypothetical protein LOTGIDRAFT_206655 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_524.1_14262.t1 | gi|585684230|ref|XP_006812542.1| | PREDICTED: putative glycogen [starch] synthase-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_524.1_14262.t1 | gi|242002240|ref|XP_002435763.1| | glycogen synthase, putative [Ixodes scapularis] | 0.0 |
| pfu_aug2.0_524.1_14262.t1 | gi|641655989|ref|XP_008179802.1| | PREDICTED: glycogen [starch] synthase [Acyrthosiphon pisum] | 0.0 |
| pfu_aug2.0_524.1_14262.t1 | gi|749752383|ref|XP_011138536.1| | PREDICTED: glycogen [starch] synthase [Harpegnathos saltator] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_524.1_14262.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_524.1_14262.t1 atgtctattcgacgtaggaacagcttctttcgtagcttcaagaatgcatatccagattttgaagaaatgctaatggatag aggagcaactgcagcagcacaaaacaaatgggttttcgagattgcatgggaagtcgccaacaaagttggaggaatctaca ctgtgataaagtcaaaggcccctgtaagtgttggggaactaggagaacagtactgccttatagggccttacaatgaagct tgtgtgcgtactgaagtagaactgctagaaccacataaccatgtgtaccgtcaaaccatacaaagcatgagagatgctgg catcagggtgttttttgggcgttggttgattgatggataccccaaggttatcttgtttgatattggttctgctgcctgga agctggacgagtttaagaaggagatgtgggagaagagtagtataggagtaccatggcatgacagagaggctaacgatgcc attatatttggagctcttgtggcttggtttgtaggagagtttcgaaagaaccttgagggaaagccgattgtcgttaccca cttccatgaatggttggcgggatgtggattaatctacctacgtaccaggaaagtggactgtacaaccatatttactacac atgctactctacttggtagatatctgtgtgcaggaagctcagatttctacaataatattggcaagtttaatttggacaag gaggcaggggaccgtcagatttaccatcgttactgtatggaaagagctgctgttcactgtgctcatgtttttactacagt gtcagaaatcacaggaatcgaggcagaacatctacttaaaaggaaaccagatgttattgtgccaaatgggttgaatgttg tcaagttcagtgccatacatgaattccagaatctacatgcaatctacaaagaaaaaatacatgattttgtacggggacac ttttatgggcattatgactttgatttggacaagacgctttacttcttcactgcgggcaggtacgagttctctaataaagg agcagacatgtttattgagtctctggccaggctcaatcactttatgaagtccagtaatagtgagatgacagtagtagctt tcttaatcttcccagcaaagaacaataactttaacgtagagtctctgagaggtcaggccatatctaaacagctgaaagag acagttcatcacgtacagaaccaaataggaaaacgcttgtttgagatctgtctaaggggcagcattccaagtggagaaga aattctcttacaagaggatgtggtcaaattaaagagatgtatatattctgctaatagaactagtttaccacctatcgtta cacataacatacaggacgatgctaatgaccaggtgttgaatgctttacgtagatgtcagctgtttaacaggagagaggac agggtcaaggttgtattccatccggagtttttgaattccaccaatccgttgtttggtttggattacgaggattttgtacg tggctgccatcttggagttttcccatcgtactatgagccgtggggatatacccctgctgaatgtaccgtgatggggatac ccagcatcaccaccaatctctccggctttggctgttttatgcaagagaacattagtgatccccaatcatatggtatctat attattgaccgcagacttaaaagtccagacgagtcagtccatcagttagctcagaacatgtttgatttcacatgtttatc ccggcgtcagcgtatcattcagaggaaccgtacagagcgactcagtgacctgctagactggaggaatcttggagtgctac ctcctcacttacaatacagtatatactggtgctcagtacaatag |
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Protein
| Protein ID | pfu_aug2.0_524.1_14262.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_524.1_14262.t1 MSIRRRNSFFRSFKNAYPDFEEMLMDRGATAAAQNKWVFEIAWEVANKVGGIYTVIKSKAPVSVGELGEQYCLIGPYNEA CVRTEVELLEPHNHVYRQTIQSMRDAGIRVFFGRWLIDGYPKVILFDIGSAAWKLDEFKKEMWEKSSIGVPWHDREANDA IIFGALVAWFVGEFRKNLEGKPIVVTHFHEWLAGCGLIYLRTRKVDCTTIFTTHATLLGRYLCAGSSDFYNNIGKFNLDK EAGDRQIYHRYCMERAAVHCAHVFTTVSEITGIEAEHLLKRKPDVIVPNGLNVVKFSAIHEFQNLHAIYKEKIHDFVRGH FYGHYDFDLDKTLYFFTAGRYEFSNKGADMFIESLARLNHFMKSSNSEMTVVAFLIFPAKNNNFNVESLRGQAISKQLKE TVHHVQNQIGKRLFEICLRGSIPSGEEILLQEDVVKLKRCIYSANRTSLPPIVTHNIQDDANDQVLNALRRCQLFNRRED RVKVVFHPEFLNSTNPLFGLDYEDFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGCFMQENISDPQSYGIY IIDRRLKSPDESVHQLAQNMFDFTCLSRRQRIIQRNRTERLSDLLDWRNLGVLPPHLQYSIYWCSVQ |
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