Gene
| Gene Model ID | pfu_aug2.0_524.1_14265 |
|---|---|
| Locus | scaffold524.1 : 225968 ... 245442 : - |
| To GenomeBrowser | scaffold524.1:225968..245442 |
| Genes list of scaffold | scaffold524.1 |
| Synonym | pfu_aug1.0_10709.1_02965 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_524.1_14265.t1 | 3 | 1 | Ax_dynein_light | 199 | 338 | 4.5e-12 | 46.2 | 4.8e-15 | 4.5e-12 | 46.2 |
| pfu_aug2.0_524.1_14265.t1 | 3 | 1 | SNARE | 268 | 313 | 4.7e-21 | 74.2 | 0.3 | 280.0 | 1.2 |
| pfu_aug2.0_524.1_14265.t1 | 3 | 2 | SNARE | 462 | 492 | 4.7e-21 | 74.2 | 0.36 | 340.0 | 1.0 |
| pfu_aug2.0_524.1_14265.t1 | 3 | 2 | Ax_dynein_light | 466 | 492 | 4.5e-12 | 46.2 | 7.0 | 6500.0 | -3.3 |
| pfu_aug2.0_524.1_14265.t1 | 3 | 3 | SNARE | 547 | 609 | 4.7e-21 | 74.2 | 5.0e-24 | 4.7e-21 | 74.2 |
| pfu_aug2.0_524.1_14265.t1 | 3 | 3 | Ax_dynein_light | 548 | 604 | 4.5e-12 | 46.2 | 0.037 | 34.0 | 4.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_524.1_14265.t1 | gi|676426049|ref|XP_009044499.1| | hypothetical protein LOTGIDRAFT_109702, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_524.1_14265.t1 | gi|524900128|ref|XP_005106488.1| | PREDICTED: axonemal dynein light chain domain-containing protein 1-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_524.1_14265.t1 | gi|260828747|ref|XP_002609324.1| | hypothetical protein BRAFLDRAFT_271120 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_524.1_14265.t1 | gi|390341130|ref|XP_783451.3| | 0.0 | |
| pfu_aug2.0_524.1_14265.t1 | gi|156401272|ref|XP_001639215.1| | predicted protein [Nematostella vectensis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_524.1_14265.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_524.1_14265.t1 atgagtacaacagtagccagccatcctggggctggagtgcagctgcaccaaggtcagggcggggactctggtgatcagcg ggctttgatgtcagcagataaaggacagatattaccagagattcgatcaagtactaatgctatagataagacaaagccac tgcctacatccctacagagtgactttataccagaggatgtattgtttgctcttacacaacctcctcccgcaaaagatcaa cttggtccaccaacccgctccaggaatttgaatacatcaatggttcaagcaagagctcctcctcagaatttatggaatca caagagacgagaaagatttaaacatctcacggagaacaccccatgtttatgtggtgcaggaagtgatatttccttcctgt acgatgtccctcaaccggagaagaagctagagagaccagataaaatagataaaagccatgccagaaaggaggctatggat agacagaaaaagccactagaattacctgatacattgatacctgatgaatatcacattgtcaagaataaaggtgtaattgg cattgaatttcatgaagacaaatatagcacacagattaaggaccatgagagacatttggtcgtgtttccatccatgcatc ctggcagtagatttgaggtgatacaattgaagaaaacgctagacagaatgttggataaagtgggaattaacgatatagac gtggagattaagggacctacccagatgcataacttattagaattgataaaaaaagagcagaatatctacaactcagtttt tcatgaggtcatcagacaaacaagtgtggaatgtgtagagagaggagaattactagcagatctgcgtaaaaaatacagtg acctgctgaataaagtacctcaacagatcaaaagagtcttcaaaatgcttgataagcaaaacaagatggaggaagaacag ggaaagagtgagggggaagaaagcacccctcctcgaaagaaaaagaaaaggcaacacattcagcggtacatgcctgaata tgaacaaacatacccatgttttagaaagtcatctattggattgacttatgcattctgcacaatctgcttttttcagcttt gctttgtgacaaaaacaaaaataaagtttagaccaaatatgaagacaagtacattaggagccttagttactcacaaagtg tgcatgagtagcagaagggagcaggcacacagggccaatcctagtaaaagcgtccttcaagaagccaagtcggcaactta cagtatgctaaatcaaaacggacttagtcagttagtgttggatatgattgtgtattgtgttattagattaatacagaatt gtaattgtttcttttgctttcagcaacaaaaattcaaaatggatcgcttgaagaatgatttccaggattctgtgacgaga tttacatcactccaaaagaaagtagcagagaaggtgaagaaatcagtgaagctgacccccaaacccccaccctctatggg aggtggttttaatgatggttatgatgatgatcaaacacgttttatggaggaggctcggagaagagaggaattacaagccc aggaacaaataatagaggatgacctggccctaatacaggacagagaggagagaatcagacagttagagtcagacatcctt gatgtaaacgaaatattcagagatttagctacaatggttaatgagcaaggagaaacaattgattccatagaagccaatgt agagaaggcatcgagtcatgtagaagctggtacacagcaattatctaaagcttcagaataccagaggaaatctcggaaga agatgtgtatactggtgacaatattaatagtggtcgtagctgtggtcgttataatcatagtgacacaggtcaagagatga |
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Protein
| Protein ID | pfu_aug2.0_524.1_14265.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_524.1_14265.t1 MSTTVASHPGAGVQLHQGQGGDSGDQRALMSADKGQILPEIRSSTNAIDKTKPLPTSLQSDFIPEDVLFALTQPPPAKDQ LGPPTRSRNLNTSMVQARAPPQNLWNHKRRERFKHLTENTPCLCGAGSDISFLYDVPQPEKKLERPDKIDKSHARKEAMD RQKKPLELPDTLIPDEYHIVKNKGVIGIEFHEDKYSTQIKDHERHLVVFPSMHPGSRFEVIQLKKTLDRMLDKVGINDID VEIKGPTQMHNLLELIKKEQNIYNSVFHEVIRQTSVECVERGELLADLRKKYSDLLNKVPQQIKRVFKMLDKQNKMEEEQ GKSEGEESTPPRKKKKRQHIQRYMPEYEQTYPCFRKSSIGLTYAFCTICFFQLCFVTKTKIKFRPNMKTSTLGALVTHKV CMSSRREQAHRANPSKSVLQEAKSATYSMLNQNGLSQLVLDMIVYCVIRLIQNCNCFFCFQQQKFKMDRLKNDFQDSVTR FTSLQKKVAEKVKKSVKLTPKPPPSMGGGFNDGYDDDQTRFMEEARRREELQAQEQIIEDDLALIQDREERIRQLESDIL DVNEIFRDLATMVNEQGETIDSIEANVEKASSHVEAGTQQLSKASEYQRKSRKKMCILVTILIVVVAVVVIIIVTQVKR |
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