Gene
| Gene Model ID | pfu_aug2.0_5273.1_12769 |
|---|---|
| Locus | scaffold5273.1 : 1 ... 18645 : - |
| To GenomeBrowser | scaffold5273.1:1..18645 |
| Genes list of scaffold | scaffold5273.1 |
| Synonym | pfu_aug1.0_17009.1_47045 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_5273.1_12769.t1 | 2 | 1 | SRCR | 35 | 133 | 0.0 | 184.1 | 8.0e-30 | 2.4e-26 | 91.9 |
| pfu_aug2.0_5273.1_12769.t1 | 2 | 1 | SRCR_2 | 45 | 76 | 7.9e-10 | 38.8 | 1.1e-07 | 0.00032 | 20.8 |
| pfu_aug2.0_5273.1_12769.t1 | 2 | 2 | SRCR | 144 | 242 | 0.0 | 184.1 | 2.7e-30 | 7.9e-27 | 93.4 |
| pfu_aug2.0_5273.1_12769.t1 | 2 | 2 | SRCR_2 | 154 | 185 | 7.9e-10 | 38.8 | 4.1e-06 | 0.012 | 15.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_5273.1_12769.t1 | gi|637279735|ref|XP_008104966.1| | PREDICTED: deleted in malignant brain tumors 1 protein-like [Anolis carolinensis] | 0.0 |
| pfu_aug2.0_5273.1_12769.t1 | gi|696978690|ref|XP_009558396.1| | PREDICTED: deleted in malignant brain tumors 1 protein [Cuculus canorus] | 0.0 |
| pfu_aug2.0_5273.1_12769.t1 | gi|390349703|ref|XP_797845.3| | 0.0 | |
| pfu_aug2.0_5273.1_12769.t1 | gi|156380637|ref|XP_001631874.1| | predicted protein [Nematostella vectensis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_5273.1_12769.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_5273.1_12769.t1 atggtggaaggttttacatcaaatcgatgtaaaagtaaaaaggcaccttttcaacattcaaaattctccaacttgaagac gcaattaactggagtaaggctcgtggatggacctgacaaagaccaaggcagagtagagatacagtataatggaacctggg gaaccatatgtgacgatgaatgggattatgtagacgcccaaattgtctgtaagatgatggggaaagctttttcagtggcc gtgcctgtctctcgtgctcgatatggacctggtaaaggaacgattcatatgggctttgttcattgtaggggagatgaacc aagcttagaattatgtgatttcaatccgtggggtgtgaactattgtcggcatacagaggatgccggtgtcatttgtcaag ataagacgcaattaactggagtaaggctcgtggatggacctgacaaagaccaaggaagagtagagatacaatataatgga atctggggaaccatatgtgaccgtggatgggattatagagacgcccaagttgtctgtaagatgatggggaaagctttttc agtggccgtgcctgtctctcgtgctcgatatggacctggtaaaggaacgattcatatgagctatgttcgatgtaggggag atgaaccaagcttagaattatgtgaattcaattattgggctgtgaacgattgtcggcatgcagaggatgccggtgtcatt tgtcaagata |
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Protein
| Protein ID | pfu_aug2.0_5273.1_12769.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_5273.1_12769.t1 MVEGFTSNRCKSKKAPFQHSKFSNLKTQLTGVRLVDGPDKDQGRVEIQYNGTWGTICDDEWDYVDAQIVCKMMGKAFSVA VPVSRARYGPGKGTIHMGFVHCRGDEPSLELCDFNPWGVNYCRHTEDAGVICQDKTQLTGVRLVDGPDKDQGRVEIQYNG IWGTICDRGWDYRDAQVVCKMMGKAFSVAVPVSRARYGPGKGTIHMSYVRCRGDEPSLELCEFNYWAVNDCRHAEDAGVI CQD |
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