Gene
| Gene Model ID | pfu_aug2.0_5273.1_12770 |
|---|---|
| Locus | scaffold5273.1 : 26186 ... 29977 : + |
| To GenomeBrowser | scaffold5273.1:26186..29977 |
| Genes list of scaffold | scaffold5273.1 |
| Synonym | pfu_aug1.0_113813.1_49687 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_5273.1_12770.t1 | 1 | 1 | gag-asp_proteas | 451 | 493 | 8.3e-06 | 25.5 | 3.9e-09 | 1.9e-05 | 24.3 |
| pfu_aug2.0_5273.1_12770.t1 | 1 | 1 | Asp_protease_2 | 454 | 524 | 4.3e-09 | 36.7 | 1.8e-12 | 8.8e-09 | 35.7 |
Transcript
| Transcript ID | pfu_aug2.0_5273.1_12770.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_5273.1_12770.t1 atggacaagtgcattaaaccttcaatcgacctgcatagtgaaagtgtgcatcccaagggggtcgactcaaaagtgactag agtccaatcaggttcacccggcagttgggtcgggggacctgagaaggtcaatggtgcacttaatgcaatgcagtctactt gtgcagatgagaatgtggatttctcctcaagacaatcagaaaccgaaggcatacaaaatcaggataaaacaggaaccaaa gaaaacaaacaaaaacctccaccacatgaaaagaagcgaactcccgatatgggagtgagaccaggtgcccaggaatagcc agcccaggcagggcattcacagagatttagtgcctcgcatatttcacatgtttatgacccaagtggacaatcacaggggc atgaccctgttgttacatgtaatttacctggcttgagtgatattaacaatccctatggtgttgcggggattacggatgcc aagcaggggcaatcacaaggactacaaagttgttttgtacaaggacaaggttacagcccctcagtaatgatgattggggc ccagacggggccatatagcagtagctttctatatatgggagttgaaggtcacatggaatctccaggggaaaatgaggtta tgatagcccagcaggggcaatggcaggggtacagccctgaatataataccccattttctggatatcaaggtcagtccata gaggaagtagggactatgacagcccagcaggggcaatcacaggggtactgccctggtgttaacactccgcatgtggaaga aatagttcgtcctaggcaaatgacgcaattgtctagtagtcacccattctgggatctaggtcaggggtacgtggtaccct tgcaggatggacagtgcacgatcggcttggtgactgtgagtcacaggggcttggaattatgtgagaattccgaccccaca aatacgattccctacactatctcctcacagtctggaggattgtcttgtgtaggaggacttgaaacacggggggacgaaac accctcgtcgttgggagctggaccaaatttcggatatgaccctgacccgaatagtagtacacctggggagttaagtgtcg tgggtagtaatggccctgggcatagggaaagggtaagtagggccaatgaaggcagttcgcaagtggttggcgaatctggt aatgaaggacatctaggtagagaatgtcctgttatgtgtggtcctttttcctatttaaaaggtcgctcaccctcaaaaga gtataaagaatgtaggagggttgcgaataccctccttggagtgcgagcaatggagtgtaaaggttacaaaccacatgctc gagtcaaggtaaattgcgaattagaggtcaacgccattgtcgacacagggtcaagtataaccctaatatcaaacaaggtt tacgacaggttgtcaaggaaaccgaaggtcaagggtcacacggaattcgaaactgctggaggcagtgttatgctcacaga taagcttgaggtaattcccttgaggatgaataattttgaaaccaaggatgtggtttacaagggagatata |
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Protein
| Protein ID | pfu_aug2.0_5273.1_12770.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_5273.1_12770.t1 MDKCIKPSIDLHSESVHPKGVDSKVTRVQSGSPGSWVGGPEKVNGALNAMQSTCADENVDFSSRQSETEGIQNQDKTGTK ENKQKPPPHEKKRTPDMGVRPGAQEXPAQAGHSQRFSASHISHVYDPSGQSQGHDPVVTCNLPGLSDINNPYGVAGITDA KQGQSQGLQSCFVQGQGYSPSVMMIGAQTGPYSSSFLYMGVEGHMESPGENEVMIAQQGQWQGYSPEYNTPFSGYQGQSI EEVGTMTAQQGQSQGYCPGVNTPHVEEIVRPRQMTQLSSSHPFWDLGQGYVVPLQDGQCTIGLVTVSHRGLELCENSDPT NTIPYTISSQSGGLSCVGGLETRGDETPSSLGAGPNFGYDPDPNSSTPGELSVVGSNGPGHRERVSRANEGSSQVVGESG NEGHLGRECPVMCGPFSYLKGRSPSKEYKECRRVANTLLGVRAMECKGYKPHARVKVNCELEVNAIVDTGSSITLISNKV YDRLSRKPKVKGHTEFETAGGSVMLTDKLEVIPLRMNNFETKDVVYKGDI |
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