Gene
| Gene Model ID | pfu_aug2.0_528.1_27501 |
|---|---|
| Locus | scaffold528.1 : 1 ... 8665 : - |
| To GenomeBrowser | scaffold528.1:1..8665 |
| Genes list of scaffold | scaffold528.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_528.1_27501.t1 | 1 | 1 | HD | 61 | 129 | 1.3e-10 | 41.3 | 1.3e-14 | 1.9e-10 | 40.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_528.1_27501.t1 | gi|395509522|ref|XP_003759045.1| | 9.80909e-45 | |
| pfu_aug2.0_528.1_27501.t1 | gi|620971831|ref|XP_001512350.2| | PREDICTED: deoxynucleoside triphosphate triphosphohydrolase SAMHD1-like, partial [Ornithorhynchus anatinus] | 5.04467e-44 |
| pfu_aug2.0_528.1_27501.t1 | gi|723577102|ref|XP_010308664.1| | PREDICTED: deoxynucleoside triphosphate triphosphohydrolase SAMHD1, partial [Balearica regulorum gibbericeps] | 7.00649e-44 |
| pfu_aug2.0_528.1_27501.t1 | gi|62087468|dbj|BAD92181.1| | SAM domain- and HD domain-containing protein 1 variant [Homo sapiens] | 9.94922e-44 |
| pfu_aug2.0_528.1_27501.t1 | gi|74181446|dbj|BAE29995.1| | unnamed protein product [Mus musculus] | 2.99878e-43 |
Transcript
| Transcript ID | pfu_aug2.0_528.1_27501.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_528.1_27501.t1 atggctgaaatgaaagtaaaggctcctaagacaatgaagatagtgaaggaccccatacatgggttcattgagctgaatcc tttggttgttaagattattgatacaccacagttccagcgactacgacacctcaagcaactaggagcagcttactacgtat atcctggagctagccacaacagattcgaacattgtttgggaacttaccatttggcaagcacacttctacatgaactgaag aaaagactcgaagaagtgaagaaaagcaacccaaatgacgacatttgcaaaattgagataactgagggagatattttgcg agtggaagtagccgccttatgtcatgaccttggacatggaccattttcacatatgttcgaaagtttgtttcttaaagaag tgagaaaagatgaaaaagcagag |
|
Protein
| Protein ID | pfu_aug2.0_528.1_27501.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_528.1_27501.t1 MAEMKVKAPKTMKIVKDPIHGFIELNPLVVKIIDTPQFQRLRHLKQLGAAYYVYPGASHNRFEHCLGTYHLASTLLHELK KRLEEVKKSNPNDDICKIEITEGDILRVEVAALCHDLGHGPFSHMFESLFLKEVRKDEKAE |
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